Brassica oleracea (wild cabbage): 106342550
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Entry
106342550 CDS
T04124
Name
(RefSeq) serine/threonine-protein kinase ATG1 isoform X1
KO
K08269
serine/threonine-protein kinase ULK2 [EC:
2.7.11.1
]
Organism
boe
Brassica oleracea (wild cabbage)
Pathway
boe04136
Autophagy - other
Brite
KEGG Orthology (KO) [BR:
boe00001
]
09140 Cellular Processes
09141 Transport and catabolism
04136 Autophagy - other
106342550
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
boe01001
]
106342550
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
boe04131
]
106342550
03029 Mitochondrial biogenesis [BR:
boe03029
]
106342550
Enzymes [BR:
boe01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
106342550
Protein kinases [BR:
boe01001
]
Serine/threonine kinases: Other
ULK family [OT]
106342550
Membrane trafficking [BR:
boe04131
]
Autophagy
Autophagosome formation proteins
Atg1 complex
106342550
Mitochondrial biogenesis [BR:
boe03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
106342550
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pkinase
PK_Tyr_Ser-Thr
MIT_ATG1
Kdo
Pkinase_fungal
YrbL-PhoP_reg
APH
Motif
Other DBs
NCBI-GeneID:
106342550
NCBI-ProteinID:
XP_013636972
UniProt:
A0A0D3BY90
LinkDB
All DBs
Position
C4:complement(31429283..31433432)
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AA seq
711 aa
AA seq
DB search
MAQLAAGMSGRVIGDYAVGRQIGSGSFSVVWEGRHLVDGTVVAIKEIAMARLSKKLQDSL
MSEIFILRKINHPNIIRFIDMIEAPGKINLVLEYCKGGDLSMFIQRHGKIPDATAKHFMQ
QLAAGLQVLRDNNIIHRDLKPQNLLLSTDDNDAALKIADFGFARSLQPRGLAETLCGSPL
YMAPEIMQLQKYDAKADLWSVGAILFQLVTGRTPFTGNSQVQLFQNIMRSTELQFPVDCR
DLTTDCKDLCQKLLRRNPVERLTFEEFFHHPFLSDRQSYDVPRSRSGSRTMDGFHSSGSS
PSGKMEEVSHDDSLPFFLDDDSSEPEGSPSYIKHTSPMKSSYGFSVERREAAASSPLKNM
ELNSRYSRVSHRADTNNFKFESHRLIDRNQFKPSSLPDSRSLSTQGRVGDTPDSIDQDYV
LISGPSVDIPSSSSGSPKLFNYPFKSHSPPVEFIKRNVTSSTAPMPIAGATGRNIGGRFE
SLESPNSLPGTSHGSLNLVDAFEQPSTHSLTRIRSLQKCAATIAELVRERIDSGKQLEAF
SIQLVILAIWNQALHICHTQAASGVEGSLRQDSNRVRRNISQERSEKILSQIQREFVQEV
ERAEDFAKFVESGNTKMPDAMEIIFQAALTLGIRGGVDEVVMGEAENAVTLYTKAVRLLV
FLVVEAQTLILNPPLTLTNSVRYRIRTYIDNLISRLKHLQSHKRTSGPQKP
NT seq
2136 nt
NT seq
+upstream
nt +downstream
nt
atggctcagttggcggcggggatgagcgggcgggtaatcggggattacgcggtgggaaga
caaatcgggtcgggttcgttttcggtggtgtgggaagggaggcatcttgtagatggaacc
gtggttgcaatcaaggagatcgccatggctaggcttagtaagaagttgcaagatagtctc
atgtcggagattttcatcttgaggaagatcaatcaccccaacatcatccgcttcatcgac
atgatcgaggctcccgggaaaataaatttggtgttggagtactgcaaagggggtgatctt
tctatgtttattcagcgtcatggaaagatccctgatgctactgctaagcattttatgcag
cagttagctgctggtttgcaagttcttcgtgacaataatatcattcaccgagatttaaag
cctcagaatcttcttctatccacagatgataacgatgcagctctgaagattgctgatttt
ggatttgcaagatcgttgcagccaaggggtttggcagaaactttgtgtggttccccattg
tatatggccccagagattatgcagcttcagaagtatgatgcaaaggcagatctctggagt
gttggtgctatattatttcaacttgtgacaggaaggaccccttttacaggaaacagccaa
gttcagttgttccagaacattatgagatcaactgaattgcagtttccagtagactgtaga
gatttgactactgactgtaaagatctatgtcagaaattgctgcgccgtaatccagtggaa
cgtttgacgtttgaagagttctttcatcacccttttctttcagacagacaatcatatgat
gtgccaaggagtagatcaggttcaagaacgatggatggttttcattcatcaggaagcagt
ccctcaggaaaaatggaagaagtttctcatgatgactctttgccgttctttttagatgat
gattctagtgaacctgagggaagcccttcatatattaaacatacttctccgatgaagtca
tcttatggatttagtgttgagagaagggaagcagcagcatctagtcctttgaaaaacatg
gaacttaattccagatatagtagagttagtcatagagcagataccaataacttcaagttc
gaaagccatagattaatagatagaaaccaattcaaaccgtcaagcttgcctgattccaga
tcacttagtactcaaggaagagtaggggatacgccagattcaatagatcaagattatgtt
ctgatatctggaccatcagtggatataccatcatcttcatctggctctccgaagcttttc
aattacccgttcaaatcacattcccctcctgtggagttcattaaaagaaacgtaacgagt
tcaacggctcctatgccaatagctggtgccactggcaggaacattggtggtcggtttgaa
agcttggagagcccaaattctctcccgggtacttcccatgggtctctgaaccttgtggat
gcttttgaacagccatcaactcacagcttgacaagaatccggtctttgcaaaagtgtgca
gcaacgattgcagaattggttcgtgaaaggattgattcaggtaaacagttagaagctttc
tcaatccaactggtgattcttgcgatttggaaccaagcactgcacatctgccatactcag
gcagcctctggtgtagaaggaagcctgcgccaagacagtaacagagtaagaagaaatatt
agccaagaaagatcagagaaaatattgtctcagattcagagagagtttgtccaggaggtt
gagcgtgctgaagattttgccaagtttgttgaatctggcaatacaaagatgcctgatgcg
atggagataatattccaagcagctcttactcttggcatacgtggaggagtagatgaggtg
gtgatgggagaggcagagaacgcagtaaccctctacacaaaagcggtgcgcttgctagtc
ttccttgtagtggaggcgcaaacgctgattctaaatccacctttaacactcacaaactca
gtaaggtatcgaatcagaacatatatagataacctcataagcagactaaaacacctacaa
tcccataaaagaacttcaggtcctcagaaaccatga
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