Brassica oleracea (wild cabbage): 106342649
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Entry
106342649 CDS
T04124
Name
(RefSeq) long chain acyl-CoA synthetase 1-like isoform X1
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
boe
Brassica oleracea (wild cabbage)
Pathway
boe00061
Fatty acid biosynthesis
boe00071
Fatty acid degradation
boe01100
Metabolic pathways
boe01212
Fatty acid metabolism
boe04146
Peroxisome
Module
boe_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
boe00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
106342649
00071 Fatty acid degradation
106342649
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
106342649
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
boe01004
]
106342649
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
boe04147
]
106342649
Enzymes [BR:
boe01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
106342649
Lipid biosynthesis proteins [BR:
boe01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
106342649
Exosome [BR:
boe04147
]
Exosomal proteins
Exosomal proteins of breast milk
106342649
Exosomal proteins of breast cancer cells
106342649
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-GeneID:
106342649
NCBI-ProteinID:
XP_013637098
UniProt:
A0A0D3BNM7
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Position
C4:complement(492671..498278)
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AA seq
660 aa
AA seq
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MKSFAAKVEEGVKGENGKPSVGPVYRNLLSEKGFPPIDSEITTAWDIFCKSVEKFPGNKM
LGWRPIVDKKVGPYVWKTYKEAYEEVLQIGSALRALGAEPGCRVGIYGINCPQWIIAMEA
CAAHTLICVPLYDTLGSGAVDYIVDHAEIDFVFVQDTKIKGLLEPDSICSKRLKAIVSFT
NVSKEDSIKASEIGVKTYSWLDFLHMGREKPEEISPPKPFNTCTIMYTSGTSGDPKGVVL
THEAVATFVVGVDLFMDQFEYKMTHEDVYLSFLPLAHILDRMNEEYFFRKGASVGYYHGD
LNVLRDDIQELKPTYLAGVPRVFERIHEGIQKALQELNPRRRFIFNALYKHKLSWLNRGY
SHSKASPMADLIAFRKIRDKLGGRIRLLISGGAPLSPEIEEFLRVTCCCFVLQGYGLTET
LGGTAMCIPDEMCMLGTVGIPAVYNEIRLEEVAEMGYDPLGENPAGEICIRGKCLFSGYY
KNPKLTDEVLKDGWFHTGDIGEIQPNGVLKIIDRKKNLIKLSQGEYVALENLENIYGQNS
VVQDIWVYGDSFKSMLVAVIVPNPEVVNRWAKDLGLNKPFEELCSLTELQEHIILELKST
AEKNKLKRFEYIKAVTVEIKSFDLERDLVTATLKNKRNNLLKYYQAQVDEMYRKLASKKI
NT seq
1983 nt
NT seq
+upstream
nt +downstream
nt
atgaagtctttcgcggcaaaggtggaagaaggagtcaaaggggaaaacgggaagccgtca
gtaggtccggtgtaccggaatcttttgtcggaaaaagggtttcctccaatagattctgaa
atcaccactgcttgggacatattctgtaaatctgtggagaaattccctggcaacaagatg
cttggatggcgtccaatcgtagataagaaggttggaccgtatgtgtggaaaacgtacaag
gaagcatatgaagaagttctgcagattggctctgcattacgtgctctcggagctgagcct
gggtgtcgagtgggaatctatggaattaattgtcctcagtggatcatagcaatggaggct
tgtgcagctcacactctaatctgtgtacctctatatgatacattgggttctggagccgtg
gattatatcgttgatcacgcggaaatcgattttgtattcgtccaagacaccaagattaaa
gggcttcttgagccagattccatatgttctaaacggctaaaagctatagtttccttcact
aatgtgagcaaagaagacagcatcaaggcttcagaaattggagtcaaaacgtactcttgg
ctcgattttcttcatatgggacgtgagaaaccggaagagattagtccacctaaaccattt
aacacatgcaccataatgtacacaagcggcacgagtggtgaccctaaaggtgtggttttg
actcacgaagcggtggcgactttcgttgttggggtggatctcttcatggaccagttcgaa
tacaagatgacacatgaagatgtgtatctctccttcttgccgctggctcatattcttgac
cgtatgaatgaggaatacttctttcgcaaaggggcttccgttggctattaccatggagat
ttgaatgtgttacgtgatgacattcaagaattgaaaccaacttatctagctggagttcca
agagtgttcgagagaattcacgagggtattcaaaaggctcttcaggaacttaaccctaga
aggagatttatcttcaatgctctctacaaacacaagctttcatggttgaatcgtggatac
tcgcatagcaaagcttcacccatggctgatttaattgctttcagaaagattagagacaaa
ttgggaggtcgaatccggttgctaatatctggaggagcacctctgagccctgagattgaa
gagttcttaagagttacttgttgttgctttgtcctccaaggctacggtctgacggagacg
cttggaggaactgctatgtgtataccggatgagatgtgtatgttagggacagtcggtata
ccggcggtttacaacgagataaggcttgaggaggtggctgaaatgggctacgacccactc
ggtgaaaatccagcaggcgagatctgtataagaggaaaatgtttattttctggatattac
aagaaccctaaacttactgatgaagtcttgaaagacggatggttccatacaggagatata
ggtgagattcaaccaaatggggtgctcaagataattgatcgtaaaaagaatttgatcaaa
ctttctcaaggagagtacgttgctcttgagaacttggaaaacatctacggtcaaaactct
gttgtccaagatatatgggtttatggagacagcttcaaatcaatgcttgtcgcggtgatt
gttccaaaccctgaagtcgtgaaccggtgggctaaagatctcggtttaaataaaccattc
gaagaactatgttctctcacggagttgcaagaacacatcattttagaactgaagtccacg
gcagagaagaacaagctaaaaaggtttgagtacatcaaagcagtgacggtggagataaaa
tctttcgacttagagagagacttggtgactgcgacgctcaagaataagaggaacaatctt
ctcaagtattatcaggcacaagtcgacgagatgtaccgaaaattggcgtcaaagaaaatc
tga
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