Brassica oleracea (wild cabbage): 106342699
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Entry
106342699 CDS
T04124
Name
(RefSeq) cysteine protease ATG4a-like isoform X1
KO
K08342
cysteine protease ATG4 [EC:3.4.22.-]
Organism
boe
Brassica oleracea (wild cabbage)
Pathway
boe04136
Autophagy - other
Brite
KEGG Orthology (KO) [BR:
boe00001
]
09140 Cellular Processes
09141 Transport and catabolism
04136 Autophagy - other
106342699
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
boe01002
]
106342699
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
boe04131
]
106342699
03029 Mitochondrial biogenesis [BR:
boe03029
]
106342699
Peptidases and inhibitors [BR:
boe01002
]
Cysteine peptidases
Family C54: Aut2 peptidase family
106342699
Membrane trafficking [BR:
boe04131
]
Autophagy
Autophagosome formation proteins
Atg8 conjugation proteins
106342699
Mitochondrial biogenesis [BR:
boe03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
106342699
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_C54
Motif
Other DBs
NCBI-GeneID:
106342699
NCBI-ProteinID:
XP_013637156
UniProt:
A0A0D3BPQ0
LinkDB
All DBs
Position
C4:complement(2933964..2936295)
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AA seq
454 aa
AA seq
DB search
MKALTDRFVPQQRSPSPPTPLVSSDSEHSDNKCTLWSTSSSVSQPYRESSSTSGRKQLCA
ATWTSLVKKVSMASGAIKRFQDRVLGPNRIGLPSTTSDFWLLGVCYKLSEDEETDDGSVV
AALKQDFSSRILMTYRKGFEPIKDTSYTSDVNWGCMIRSSQMLFAQALLFHRLGRSWRNN
KSEVSSVRPEQEYLETLEPFGDSEASAFSIHNLIQVGESYGLAAGSWVGPYAICRSWESL
ACKKRKQSDSLPMAIHIVSGSEDGERGGAPVLCIEDVIKSCVEFSRGEDEWAPLLLLVPL
VLGLDRVNPRYIPSLKATFTFPQSLGVLGGKPGASTYIVGVQDDNGFYLDPHDVQQVVTV
NKETLDVDTSSYHCNVLRYVPLESLDPSLALGFYCPDKADFDDLCLRASTLAEESKGAPL
FTVTQTHSLISHHSSCEFVEDTGEEHGEDDWQLL
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
atgaaggctttaactgatagatttgttcctcaacaacgttctccatcacccccaacacct
ctagtttcatcagattcagaacatagtgataataagtgtaccttgtggtcgacttcttcc
tcagtttctcaaccgtatagggagtcgtcttcaacttcggggcgtaagcaactttgcgct
gctacttggacatcacttgtaaagaaagtctctatggcgagcggtgcgatcaagaggttc
caggaccgtgttttaggaccaaacaggattggtcttcccagcacaacaagcgacttttgg
ctactaggcgtctgttataaattatccgaggatgaagaaacagatgatggcagcgtagtg
gctgcattgaaacaagatttttcttcgagaatactgatgacatatcgtaaaggctttgaa
cctatcaaggacacaagttacaccagcgatgtaaactggggttgcatgatccggagcagt
cagatgctttttgctcaggcgttgctgttccatagactggggaggtcttggaggaacaac
aagtccgaggttagttcagtgcggcctgagcaggagtacttggagacgctggaacctttt
ggtgattcagaggcttcggctttctctattcacaatcttatacaagttggagagtcttat
ggtctcgctgctgggtcatgggtgggaccgtatgctatttgccggtcgtgggagtcgtta
gcgtgcaagaagaggaaacaaagtgattcgcttcctatggctattcatatagtttctggt
agcgaagatggggagagaggtggtgctccagttctatgtatagaagatgtgatcaagtct
tgtgtggagttctcgagaggagaggatgagtgggcaccgcttctgctcttggtcccgttg
gttctcggtcttgacagagtgaatcccaggtacattccatctctcaaagccacgtttact
ttccctcaaagccttggagttttgggtggaaagccaggtgcttcgacttacatagttggc
gttcaagacgacaatggtttctaccttgatccgcatgatgttcagcaggtggtcacagtg
aacaaggagactctagatgttgacacgtcatcatatcattgcaatgtgcttcgttacgtt
cctttggaatcacttgacccatcactagctctaggattctattgccccgacaaagctgac
ttcgatgacttgtgtctccgagcatcgacactagctgaggaatcaaaaggtgctccgttg
ttcaccgtgactcaaacccacagcttgatcagccaccacagcagctgcgagtttgttgaa
gatacaggggaagaacatggagaagatgactggcaattgctctga
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