KEGG   Brassica oleracea (wild cabbage): 106342719
Entry
106342719         CDS       T04124                                 
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein 1
  KO
K12741  heterogeneous nuclear ribonucleoprotein A1/A3
Organism
boe  Brassica oleracea (wild cabbage)
Pathway
boe03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:boe00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    106342719
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:boe03019]
    106342719
   03041 Spliceosome [BR:boe03041]
    106342719
Messenger RNA biogenesis [BR:boe03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     106342719
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     106342719
Spliceosome [BR:boe03041]
 Common components
  Common spliceosomal components
   hnRNP proteins
    106342719
SSDB
Motif
Pfam: RRM_1 RRM_7 RRM_PARP14_3 SF3a60_bindingd RRM_Nup35
Other DBs
NCBI-GeneID: 106342719
NCBI-ProteinID: XP_013637187
UniProt: A0A0D3C082
LinkDB
Position
C4:37727818..37730076
AA seq 421 aa
MDPYATETVVDEENHEVKPSEDAEDDDDKSQPQSGGGIDSAGKIFVGGLARETTSAEFVK
HFEKYGEITDSVIMKDRKTGQPRGFGFVTYADSSVVDKLIQDNHIINGKQVEIKRTIPRG
SMSSSNEIKTKKIFVGGIPSTVDDDEFKEFFMQFGELKEHQIMRDHATGRSRGFGFVTYE
SEDMVDLLLAKGNRIELSGTQVEIKKAEPKKPNSVTTPSRRFGDSRSNFGGGYGDGYGGG
PGGGYGGPDGPYKSGGGYGGGRSGDYGGYGGEFGGYGGGGYGGGVGPYRGGEPPLGYSGR
YGGGGGGGYNRGGYGMGGGGGGGYGGGPGDMYGGPYGEPAGGYGGPSGSYGSGYGSGGYG
GGGYRGSSGGYDMGGTGVGGGGGYPGGGGGSGGGSFYGGAGGGGSRGGYGGGSGRYHPYG
R
NT seq 1266 nt   +upstreamnt  +downstreamnt
atggacccttatgcaacggaaacagtcgtggatgaggagaaccacgaagtgaaaccatcc
gaagatgctgaggacgatgacgacaaatctcagcctcaatctggtggtggcatcgatagt
gcaggaaagatatttgttggaggtttagccagggagacaacttcagctgagttcgtcaag
cattttgagaagtacggagagattacagattctgtgattatgaaggataggaaaactgga
cagccccgagggtttgggtttgttacttatgctgattcctctgtggtcgacaaacttatc
caggacaatcacattataaacgggaagcaggttgagattaagcggacgataccgagagga
tccatgagctcctccaacgagatcaaaaccaagaagatatttgttggtggaatcccttca
actgttgatgatgatgagttcaaggagttctttatgcaatttggagagctcaaggaacac
cagattatgcgtgatcacgcaactggaagatcgcgtgggtttgggtttgttacatatgaa
agtgaagacatggttgatcttctcttggcaaaaggaaacagaatcgagctctctgggacc
caggttgagataaagaaggcagagccgaagaaaccaaactcggtaacaaccccttcaagg
cggtttggtgactcacgctctaactttggcggaggctatggagacggttatggtggagga
cctggcggtggatatggtggtccagatggtccttacaaatctggtggcggctatggaggt
ggccggtctggtgactatggagggtacggaggagagtttggcgggtatggtggcggtgga
tatggtggtggtgttggaccttatagaggaggagagcctccacttgggtactctggtcgt
tatggaggaggaggcggtggtggttacaacagaggtggttacggcatgggaggtggagga
ggaggagggtacggtggtggacctggagatatgtatggtgggccgtacggtgagccagca
ggtggttatggtggaccaagtgggagttatggaagtggatacggtagtggtgggtatggt
ggaggaggctatagaggcagcagtggtgggtatgacatgggtggtactggagttggaggc
ggaggaggttaccctggtggtggcggaggaagtggaggaggctcgttctatggtggtgca
ggaggaggaggaagtagaggaggatatggaggaggttcgggacggtaccatccttatgga
aggtag

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