Brassica oleracea (wild cabbage): 106342785
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Entry
106342785 CDS
T04124
Name
(RefSeq) poly [ADP-ribose] polymerase 1 isoform X1
KO
K24070
poly [ADP-ribose] polymerase 1 [EC:
2.4.2.30
]
Organism
boe
Brassica oleracea (wild cabbage)
Pathway
boe03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
boe00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
106342785
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
boe03032
]
106342785
03036 Chromosome and associated proteins [BR:
boe03036
]
106342785
03400 DNA repair and recombination proteins [BR:
boe03400
]
106342785
Enzymes [BR:
boe01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.2 Pentosyltransferases
2.4.2.30 NAD+ ADP-ribosyltransferase
106342785
DNA replication proteins [BR:
boe03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
106342785
Chromosome and associated proteins [BR:
boe03036
]
Eukaryotic type
Centrosome formation proteins
Centriole proteins
106342785
DNA repair and recombination proteins [BR:
boe03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Other BER factors
106342785
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PARP
zf-PARP
PARP_reg
PADR1_N
WGR
Zn_ribbon_PADR1
BRCT
BRCT_2
PTCB-BRCT
BRCT_3
BBS7_hp
Motif
Other DBs
NCBI-GeneID:
106342785
NCBI-ProteinID:
XP_013637272
LinkDB
All DBs
Position
C4:11859631..11865250
Genome browser
AA seq
966 aa
AA seq
DB search
MASPDKPWRAEYAKSSRSSCKSCKSPINKETFRLGKLVQATQFDGVMPMWHHASCILKKT
KQIKSADDVEGLESLRWEDQQKIRQYVESGAGNNTTSTSTASSGGNAKLEYGIEVSQTSR
AGCRKCSEKILKGEVRVFSKPEGPGNKGLMWHHARCFLEMSPSTELKSLSGWGSIPDSDQ
EALLPLVKKGQQAAKTAGTKRRNDSDDNEKSKQAKTMSASGALQPCSKDKEMEAQSKELW
NLKDDLKKHVTTAELREMLEINEQSTRGSELDLRDKCADGMMFGPLALCPVCSGHVSFSG
GIYRCNGYISEWSKCSHATSDPVRIKGKWKIPEETENQFLVKWNKSQKSVKPERILNPIS
PAGTSQGQGSKAAADSLRSEKLDDLRVSIAGSSKERQAWKKKIEEAGAEFHAKVKKGTSC
LVVCGQTDMEDSEMRKARRMKVAVVREDYLVDCFKKQRKLPFDKYKLEDAGEGMVTVKVK
GRSAVHEASGLQEHCHILEDGNSIYNTTLSMSDLSTGINSYYILQIIQEDKGSDCYVFRK
WGRVGNEKIGGNKLEEMEKSDAVHEFKRLFLEKTANTWESWEQKKNFQKQPGKFLPLDID
YGVNKQVAKKEPVQTISSLAPPLVELMKILFDVETYRTAMMEFEINMSEMPLGKLSKHNI
QKGFEALTEIQRLLTESDPQSSIKENLLVDASNRFFTMIPSVHPHIIRDEDDFKSKVKML
EALQDIEIASRLVGFDTDSTESLDDKYKKLHCDISPLSHDSEDYRLIEKYLNTTHAPTHT
EWSLELEEVFALEREGEFDKYAPHREKLGNKMLLWHGSRLTNFVGILNQGLRIAPPEAPA
TGYMFGKGIYFADLVSKSAQYCYTSKENPVGLMLLSEVALGEIHELTKAKYMDKPPRGKH
STKGLGKKVPQDSEFAKWRDDVTVPCGKPVPSKAKASELMYNEYIVYNTAQVKLQFLLKV
RFKHKR
NT seq
2901 nt
NT seq
+upstream
nt +downstream
nt
atggcgagcccagataagccgtggagggctgagtatgcaaagtcgtcgaggtcttcctgc
aagtcttgcaagtcccccatcaacaaggagacctttcgccttggaaagcttgttcaagcc
actcaattcgatggcgtcatgcccatgtggcaccatgcttcttgtatactcaagaaaacc
aagcagattaaatcagctgatgatgttgaaggcttagaatcacttcgttgggaagatcag
caaaagattagacaatatgtcgaatctggagcagggaataataccacaagcacgagcacg
gccagtagcggtggcaatgccaagctagaatatgggattgaagtgtcacaaacttctcgt
gctgggtgcagaaaatgcagcgagaaaatcttgaaaggagaggtacgtgtattctctaag
cctgaaggcccgggtaacaaggggttgatgtggcaccacgcaagatgtttccttgaaatg
tctccctctactgaactgaaaagtttgtctgggtggggaagcataccagactcagatcaa
gaagctcttcttcccttggtgaagaaaggtcagcaagcagccaaaactgcaggcacaaaa
agaagaaatgattctgatgacaacgagaagtcaaaacaagctaagactatgtctgcaagc
ggtgctttacaaccttgtagcaaagacaaggaaatggaggcacaaagtaaggaactgtgg
aacctgaaggatgacctgaaaaaacatgttacaacagctgagttgcgggagatgcttgaa
ataaatgaacaaagtacaagaggatcagaacttgatctgcgggataagtgtgctgatggc
atgatgtttggtccactcgctctctgccctgtttgctctggtcatgtttccttttctgga
ggaatttaccgatgcaatggttacatttcggaatggagcaaatgttctcatgccacttct
gatccagtccgcatcaaagggaagtggaaaatccctgaagaaacagaaaatcagttcctt
gtgaagtggaataagtcgcagaagagtgtgaagccagaacgtattttgaaccctatatca
cccgctggaacatcccagggtcaaggttctaaagctgcagctgactcattaaggagcgaa
aagctggatgatcttagagtttcaattgccggatcctctaaggaacgccaagcatggaag
aagaaaattgaggaagccggagcagaatttcatgctaaagttaaaaaaggtacaagctgt
ttggttgtctgtggccagacagatatggaagattctgaaatgagaaaggcaaggaggatg
aaagtggcagtcgttagagaggattatttggttgactgtttcaaaaagcagaggaagctt
ccatttgacaagtacaaacttgaagatgctggtgagggcatggtcactgttaaagtaaaa
gggcgaagtgctgtgcatgaggcatctggcctccaagagcactgtcacattcttgaagat
gggaacagtatctataacacaactctgagcatgtctgatctttctaccggtatcaatagt
tattacatactccagattatccaagaagataaaggttcagattgctacgtgtttcgtaaa
tggggccgagttggaaatgaaaagattggaggtaacaaactggaggagatggaaaagtct
gatgcagttcatgaattcaaacgtctatttcttgaaaagactgcaaacacatgggaatct
tgggaacaaaaaaagaatttccagaaacaacctggaaaatttctcccattggacattgat
tatggagtaaacaagcaagtagcaaagaaagagccagttcagaccattagcagccttgct
cctccattagtagaattgatgaagattctttttgatgtggaaacataccgaactgctatg
atggagttcgagataaacatgtcggagatgccacttgggaaacttagcaaacacaatata
cagaagggttttgaggcattgacagagatacagaggctgttgactgaaagcgacccccag
tcttctatcaaagaaaacttgcttgttgatgctagcaatagattttttaccatgatccct
tcagttcatcctcatattattcgagatgaagatgactttaagtcaaaggtgaaaatgctc
gaggcgctgcaggacatcgaaatagcttcgagattagttggctttgatactgatagcact
gaatcactggatgataaatataagaaactgcattgcgatatttcaccactttctcatgat
agtgaggattatcggttgattgagaagtatcttaacacaactcatgccccaacacatacg
gagtggagccttgaactggaggaagtttttgccctcgaaagagaaggagagtttgataaa
tatgctccgcacagggaaaaacttggcaataagatgctcctatggcatggttctcggttg
acaaactttgttggaattctgaaccaaggactgagaattgcgcctccagaagctcctgct
actggatacatgtttggcaaggggatttactttgctgaccttgtcagtaaaagtgcccag
tactgctacacttctaaggaaaacccggtgggtctaatgcttctgagcgaagttgcattg
ggagaaatacatgagctaacaaaagccaagtacatggataaacctccgagggggaaacac
tcgaccaaagggcttggcaagaaagtgcctcaggattcagagtttgccaagtggagagat
gatgtgacagttccttgtggaaaacctgttccatcgaaggccaaggcttctgagcttatg
tacaacgagtatatcgtctacaatactgcccaggtgaagctgcagttcttgttgaaagta
cggttcaagcacaagagatga
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