Brassica oleracea (wild cabbage): 106342829
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Entry
106342829 CDS
T04124
Name
(RefSeq) OTU domain-containing protein 5-like isoform X1
KO
K12655
OTU domain-containing protein 5 [EC:
3.4.19.12
]
Organism
boe
Brassica oleracea (wild cabbage)
Brite
KEGG Orthology (KO) [BR:
boe00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
boe01002
]
106342829
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
boe04121
]
106342829
Enzymes [BR:
boe01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
106342829
Peptidases and inhibitors [BR:
boe01002
]
Cysteine peptidases
Family C85
106342829
Ubiquitin system [BR:
boe04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
OTU
106342829
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OTU
Peptidase_C65
UBA
UBA_9
Motif
Other DBs
NCBI-GeneID:
106342829
NCBI-ProteinID:
XP_013637322
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All DBs
Position
C4:16204182..16207132
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AA seq
493 aa
AA seq
DB search
MARILVQRGSSSNASHRSTPSSSASATEPPPVTVYEETTDEVNVVEEEEEEAECSDAKDV
SSLPSDEPLDREDDDEGLVVSENAALVVVEGEGVDCDSLVSGGDVPDSPPLPVPPPPKPS
SNRRSILGSFGDLQIGATRRGAGPRSLVSTRGSPTGSHPSSPRSQSENEGYNSSDEHTPS
FTPSHAGSGSEREHQFETEIRQSKGFEIRRMLEDGNCLFRAVADQVYGDSESYDLTRQMC
MDYMEHERDHFSQFITEGFTSYLKRKRRDKVYGNNVEIQALAEMYNRPIHIYSYSTEPIN
IFQGSYNTDTPPIRLSYHHGNHYNSLVDPHRLTVGAGLGFSSLTGRQVDGEQVKAAIKAQ
QEHQIDNALIAEGRYYSDLELTEKEIERSVMEASRAEYLMERSKPRIGPKESSTSNAGTS
SSSGATGTSGSDRKPIEKTVLSSSIEMVLSMGFSYTQAIEAYSIFGDDVDSMVCYVLETS
CGSKNRRKGKATE
NT seq
1482 nt
NT seq
+upstream
nt +downstream
nt
atggctcggatcttggttcagcgaggaagttcttccaatgcaagccaccgctctactccc
tcctcgtctgcctcagcaacagaaccaccaccagtgactgtttatgaagaaactacggat
gaggttaacgtagttgaagaagaagaagaagaagcagagtgttctgatgctaaggatgta
tcatcactccccagtgatgaacctttggatagagaagatgacgatgaaggtttggttgtt
tcggaaaacgctgctcttgttgttgttgaaggtgaaggtgtagattgtgattctctggtt
agtggtggcgatgtccctgattcaccacccttacctgttcctcctccaccgaagccttct
tctaataggagatccatcttggggagttttggtgatttacaaatcggagcaacaagaaga
ggggctgggcctcgctctcttgtatccactaggggttcaccaacgggatcacatccttct
tctccaagatcacagagtgagaacgaaggctataacagttctgatgagcatacgccatct
tttacgccctctcatgcaggctctggctcggaacgagaacatcagtttgaaaccgagatt
agacaatcaaaaggctttgaaattaggcgtatgctggaggatggaaactgtctctttcgg
gctgttgcagatcaagtatatggggactcagagtcatacgacttaactagacaaatgtgc
atggattacatggaacacgagagggatcacttttctcagttcataactgaaggctttacc
tcttacttgaagaggaaaagaagagacaaggtctatggaaacaacgtggagatccaagct
ttggcagaaatgtataataggcctatccacatttactcatatagcacagagcctatcaac
atatttcaagggagctacaacaccgatacacctcctataaggctgagttaccaccatggg
aatcattacaattcgttggttgatccacatcggttgacagttggtgcaggacttggattt
agtagcctgactgggagacaagtggacggggagcaggtgaaagctgctataaaggctcag
caagaacatcagattgataatgcgctcatagcagaagggagatattactctgaccttgag
cttactgagaaggaaatagaacgatctgtaatggaagcttctcgtgctgaatatcttatg
gaacggtctaaaccacgaattggtcccaaggaatcatccacatctaatgctgggacgtcg
tcctcttctggagctacaggaacttcaggcagtgataggaaaccaatcgagaagacggtg
ctgagcagcagcattgagatggttttgtcgatggggtttagctacacgcaggccattgaa
gcttatagcatttttggggatgacgttgactctatggtctgctatgtactggagacgagc
tgtggcagcaaaaaccgacgcaaaggcaaagccacagaatag
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