KEGG   Brassica oleracea (wild cabbage): 106342902
Entry
106342902         CDS       T04124                                 
Name
(RefSeq) autophagy-related protein 18a
  KO
K22991  WD repeat-containing protein 45
Organism
boe  Brassica oleracea (wild cabbage)
Brite
KEGG Orthology (KO) [BR:boe00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:boe04131]
    106342902
Membrane trafficking [BR:boe04131]
 Autophagy
  Other autophagy associated proteins
   Others
    106342902
SSDB
Motif
Pfam: PROPPIN Beta-prop_THOC3 BCAS3_WD40 Beta-prop_IFT122_1st Beta-prop_EML_2 Beta-prop_WDR5 WD40 WD40_WDHD1_1st WD40_CDC20-Fz WD40_Prp19 Beta-prop_WDR3_1st ANAPC4_WD40 Beta-prop_WDR3_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_WDR36-Utp21_2nd CFAP251_N Beta-prop_RSE1_2nd Beta-prop_Vps41 WDR55 Beta-prop_IFT140_2nd WD40_Gbeta Beta-prop_EML Beta-prop_HPS5 Beta-prop_WDR19_1st WD40_MABP1-WDR62_2nd PEP5_VPS11_N Ge1_WD40 DUF7099 Beta-prop_NOL10_N Beta-prop_VPS8
Other DBs
NCBI-GeneID: 106342902
NCBI-ProteinID: XP_013637418
UniProt: A0A0D3BW77
LinkDB
Position
C4:24615663..24617938
AA seq 419 aa
MATVSSASPWPSDSTSALDSNCTVPSHHRDRGDETEPLDSFSSMSLNSEEITHNSDRIPE
SQTPANPPPSLLHLSFNQDHACFAVGTDRGFRILNCDPFREIFRRDFDRGGGVAVVEMLF
RCNILALVGGGPDPQYPPNKVMIWDDHQSRCIGELSFRSDVRSVRLRRDRIIVVLEQKIF
VYNFADLKLMHQIETIANPKGLCAVSQGAGSMVLVCPGLQKGQVRIEHYASKRTKFVMAH
DSRIACFALTQDGHLLATASSKGTLVRIFNTVDGTLRQEVRRGADRAEIYSLAFSSNAQW
LAVSSDKGTVHVFGLKGNSGAQVKDTPRIASDLTRTSSSPSSSLSLFKGVLPKYFSSEWS
VAQFRLVEGTQYVVAFGHQKNTVVILGMDGSFYRCQFDPVNGGEMSQLEYHNCLKPPVF
NT seq 1260 nt   +upstreamnt  +downstreamnt
atggccaccgtctcctccgcttctccctggccaagcgattccacctccgccttagattcg
aactgtactgttccctctcaccaccgcgatcgtggagacgagaccgagcctctcgattcc
ttctcctccatgagcctcaactccgaagagattactcataattccgatcgaattccggag
tctcaaacaccggcgaatccacccccgtcgctgctccacctctccttcaaccaggaccac
gcctgcttcgccgtcggcaccgaccgcggcttccggatcctcaactgcgatccgttccgc
gaaatcttccggcgcgatttcgatcggggcggtggagtcgccgtcgtggagatgctcttc
agatgcaatatcctagcgctcgtaggcggcggacctgatccgcagtatccgccgaacaag
gtcatgatttgggacgatcaccagagccggtgcatcggcgagctctccttcaggtccgat
gttcgatccgttaggctcaggagggatcggattatcgtcgtcctcgagcagaagattttt
gtttacaacttcgcggaccttaagctgatgcatcagattgagactattgcgaaccctaag
ggcttgtgcgctgtctctcagggtgctggctctatggtgttggtgtgtcctggtttgcag
aaaggacaagtgaggatcgagcattatgcctcgaaacggactaagttcgtcatggctcat
gattcgaggattgcttgctttgctctcacgcaggatgggcatttgttggccacggctagc
tctaaggggactctggttcggatctttaatactgttgatggcaccttgcgccaagaggtt
aggaggggtgcagatagagcagagatatacagtctggctttctcttcaaatgctcagtgg
ttagctgtctcaagtgacaaaggaaccgtccatgtctttggtctcaaaggcaactccggt
gctcaggtgaaagacacacccagaattgcatctgatcttactcgtacttcctcatcccca
tcctcgtccctgtcattattcaaaggagtgttgcccaagtatttcagctcggagtggtcg
gtggctcagttccggttggttgaaggaactcagtacgtagtcgcctttggacatcagaag
aatactgttgttattcttggcatggatgggagcttctacagatgccagtttgatccggtg
aatgggggagaaatgtctcagcttgagtatcacaactgtctaaaacctcctgttttctag

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