KEGG   Brassica oleracea (wild cabbage): 106342972
Entry
106342972         CDS       T04124                                 
Name
(RefSeq) protein CCA1 isoform X1
  KO
K12134  circadian clock associated 1
Organism
boe  Brassica oleracea (wild cabbage)
Pathway
boe04712  Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:boe00001]
 09150 Organismal Systems
  09159 Environmental adaptation
   04712 Circadian rhythm - plant
    106342972
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:boe03000]
    106342972
Transcription factors [BR:boe03000]
 Eukaryotic type
  Helix-turn-helix
   Tryptophan clusters Myb, Myb-factors
    106342972
SSDB
Motif
Pfam: Myb_DNA-binding Myb_DNA-bind_7 Myb_DNA-bind_6
Other DBs
NCBI-GeneID: 106342972
NCBI-ProteinID: XP_013637506
LinkDB
Position
C4:complement(679876..682970)
AA seq 537 aa
METNSSGEDLVVKTRKPYTITKQRERWTEEEHNRFLDALRLYGRAWQKIEEHVATKTAVQ
IRSHAQKFFSKVEKEAEAKGVPVAQTLDIAIPPPRPKRKPNNPYPRKTGTGSLPISKTGL
NDAKESLGSAKASLPETASEDPQEDNCSDCLTHQHLSAASNASTFLEFLPSREQEQGNNK
ESNYSDLNIEAGGPHTYPTHIPLLVPLGTTSLSHAPPSQPDETSHQSFPEHIMSTLLQTP
ALYTAASFASTFGGGPQGNLAAMAAATVAAASAWWAANGMLPLCAPPFSSGNPPTTYEVN
ALTKTMDQEHSEASKARSSLESEETKNGSQPDCHHHTCAATETDAKGSDGARDRKQVDRS
SCGSNTPSSSDDVEADALVERQENGGTTNEEVKEVDGDTTNNPQTSESNARRSRISSSIL
ADPWKSVSDEGRIAFRALFAREVLPQSFTYQREEGQQQSYPMELDLNSTADDQEENRNIA
FLGASKQQLSRGRTGFKPYKRCSMEAKESRVINNTNPIISVEQKDPKRIRLETQTST
NT seq 1614 nt   +upstreamnt  +downstreamnt
atggagacaaattcgtctggagaagatctggttgttaagacgaggaagccgtatacgata
acaaagcaacgtgaaagatggactgaggaagaacataataggttccttgatgccttgagg
ctttacggtagagcttggcaaaagatagaagaacatgtagcaacgaaaactgctgtgcag
attagaagccatgctcagaaatttttctccaaggtagagaaagaggctgaagctaaaggt
gtaccagtggctcaaacgctagacatagctattcctcctccacgccctaaacgtaaacca
aacaatccttatcctcgaaagaccggaactggatctctccccatctctaaaacgggtctg
aacgatgcaaaagagtcccttggatcagcaaaagcttctcttcctgagacggccagtgaa
gatccgcaggaagacaactgctcagactgtctcactcatcaacacctctctgctgcatca
aacgcaagcacttttctagagttcttaccttcacgggaacaggaacaggggaataacaag
gagtcaaactacagtgatttgaatatagaggcaggaggacctcacacttatccaacgcat
atccctctgctagttccattgggtacaacgtctctgtcacatgctcctccttcacagcca
gacgagactagtcatcagtcctttcctgaacatatcatgtcgacccttttacaaacacca
gctctctatacagctgcatcttttgcctcaacgtttggtggcggcccacaagggaacttg
gctgccatggctgcagccaccgttgcagctgcaagtgcttggtgggccgccaatgggatg
ctcccactctgcgctcctccttttagttcaggcaaccctccaactacttatgaagtaaac
gccctcacaaaaacaatggatcaagaacactccgaggcttcaaaggctcggtcttcgttg
gaatcagaggagactaaaaatgggagtcaaccagattgtcatcatcatacttgtgcagcg
actgagactgatgcaaagggatcagatggagcgagagataggaaacaagttgacaggtct
tcttgtggctcgaacactccctcgagtagtgacgatgttgaggctgatgctttggtggag
aggcaagagaatggtggcaccaccaatgaggaagtgaaagaagtggatggggacactact
aacaacccacaaacttcagaatctaatgcgcgacgcagtagaatcagtagctctatctta
gctgatccatggaagtctgtttcagatgagggacgaattgcttttagagctctctttgca
agagaagttttgccacaaagttttacatatcagagagaggagggccaacaacaaagttat
ccaatggagcttgatcttaactccacagctgatgatcaagaagagaacagaaacatagcg
tttttgggtgcttcaaagcagcagctaagtagagggagaacaggtttcaagccttacaaa
agatgttcaatggaagccaaagaaagtagagtcatcaacaacaccaatcctatcatcagt
gttgaacagaaagatcctaagcggattaggttggaaactcaaacttcaacatga

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