Brassica oleracea (wild cabbage): 106343002
Help
Entry
106343002 CDS
T04124
Name
(RefSeq) pre-mRNA cleavage factor Im 25 kDa subunit 2-like
KO
K14397
cleavage and polyadenylation specificity factor subunit 5
Organism
boe
Brassica oleracea (wild cabbage)
Pathway
boe03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
boe00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
106343002
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
boe03019
]
106343002
Messenger RNA biogenesis [BR:
boe03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor Im (CFIm)
106343002
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NUDIX_2
NUDIX
Motif
Other DBs
NCBI-GeneID:
106343002
NCBI-ProteinID:
XP_013637552
UniProt:
A0A0D3A6C1
LinkDB
All DBs
Position
C1
Genome browser
AA seq
200 aa
AA seq
DB search
MAMSQIVNTYPLSNYSFGTKEPKLEKDTSVADRLARMKINYMKEGMRTSVDAILLVQEHN
HPHILLLQIGNTFCKLPGGRLKPGENEVEGLKRKLTSKLGGNSAGLVPDWKVGECVATWW
RPNFETMMYPYCPPHITKPKECKRLYVVHLSEKEYFAVPKNLKLLAVPLFELYDNVQRYG
PVISTIPQQLSRFHFNMISS
NT seq
603 nt
NT seq
+upstream
nt +downstream
nt
atggccatgtctcagattgtgaacacgtacccgctttcgaactacagcttcggaacaaaa
gaaccgaagctcgaaaaagacacctccgtcgcggatcgactcgctcgtatgaaaatcaac
tatatgaaagagggcatgaggactagcgttgacgccattctgctggtacaagaacacaac
catcctcacatacttctcctgcaaattggtaacaccttctgcaaacttccaggtggacgc
ctgaaacctggagaaaatgaagttgaaggcctgaagagaaagttgaccagtaagcttgga
ggcaattccgctggtcttgtacctgattggaaggtaggagaatgtgttgctacttggtgg
cgtccaaactttgaaaccatgatgtacccttactgccctcctcacatcacgaaaccaaag
gaatgtaagagactctatgtggttcacttgtctgagaaagagtactttgcagtgcccaaa
aacttgaagctcttggccgtccctttgtttgaactctatgacaacgttcagagatatgga
ccagttatatcgaccattccgcaacagctatccagattccatttcaacatgattagttcg
tga
DBGET
integrated database retrieval system
