Brassica oleracea (wild cabbage): 106343004
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Entry
106343004 CDS
T04124
Name
(RefSeq) U-box domain-containing protein 12
KO
K27628
U-box domain-containing protein 12/13/14 [EC:
2.3.2.27
]
Organism
boe
Brassica oleracea (wild cabbage)
Pathway
boe04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
boe00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
106343004
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
boe04121
]
106343004
Enzymes [BR:
boe01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
106343004
Ubiquitin system [BR:
boe04121
]
Ubiquitin ligases (E3)
U-box type E3
106343004
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Arm
U-box
ARM_ARMC5
zf-RING_UBOX
MLKL_N
zf-C3HC4_2
Neurochondrin
zf-C3HC4_4
zf-Nse
KAP
Arm_2
zf-RING_2
zf-C3HC4
zf-rbx1
DUF7792
Motif
Other DBs
NCBI-GeneID:
106343004
NCBI-ProteinID:
XP_013637553
UniProt:
A0A0D3C2Q6
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All DBs
Position
C4:complement(44880541..44883490)
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AA seq
654 aa
AA seq
DB search
MAKTELAKILIESVKEIASISDHRPPMKIHCAHLSRRLKLLLPMLEEIRDCKNSLPEESM
MKALLSLRESLLHAKDLLIYISQVSKIYLVLERDQVMVRFQKVTALLEQALSDIPYQSLE
ISDELQEQVELVLVQLRRSIGKGRGEKYDDELYKDLLSLYDGATDSEILRRVAEKLQLMT
VTDLTEESLALLDMLSTSGGDDPGESFEKMMMLLKNIKDFVQTYNPNLDDVPLRSKPSLS
KAQDEDEKNVPEDFRCPISFKLMSDPVIVSSGQTYDRDCIKKWLEEGNSTCPKTQATLSS
DTVTPNYALRSLIAQWCESNGIEPPKRPNNPQPSSKASSSSSSSSSSFSPPSDEQLKIEA
LLCKLTSQRPEEQRSAAGEIRLLAKQNNHNRVVLAASGAIPLLVSLLMNFDDPRTQEHAV
TSVLNLSIFQENKGRIISTFGAVPGIVQVLKKGSMEARENAAATLFSLSVIDENKVTIGA
AGAIPPLVNLLSEGSQRGKKDAGTALFNLCIFQGNKGKAVRAGLVPVLMRLLTEPEGRMV
DEALAILAILSSHPEGKVVVGAADAVPFMVDFIRSGSPRNKENAAAVLVQLCSWDPQYLI
EAEKLGLMGCLIEMAENGTDRGKRKAAQLLNCFSRFNEQQKQSGLGVEGQVSLI
NT seq
1965 nt
NT seq
+upstream
nt +downstream
nt
atggcgaaaacagagctagcaaagatcttaatcgaatcagtaaaagagatcgcttcgatt
tcagatcaccgtccaccgatgaagatacactgcgcccatctctcccggcgattaaagctc
ctccttcccatgttggaagagatcagagactgcaaaaactctctccctgaagaatcgatg
atgaaggctttgctatctctccgagaatcgctcctccatgccaaggatctgcttatttat
ataagccaagtcagcaagatttacctggtcttggagagagaccaagtcatggttagattc
cagaaagtgacagctctgttagaacaagcattgagtgacattccttaccagagtcttgaa
atttcagatgagcttcaagaacaggttgagcttgttctagttcagttaagaagatcgatt
ggcaaaggccgcggcgagaagtacgatgacgagctgtataaagaccttctatctctttac
gacggtgcaacagactctgagatcctcaggagagtggctgagaagcttcagctgatgact
gtaaccgaccttacggaagagtctttggctttacttgacatgcttagtaccagcggcggt
gacgatcctggcgaaagctttgagaagatgatgatgcttctcaagaatatcaaggacttt
gtgcaaacctataatcctaacttggatgacgttccattgagatcaaaaccgtcgctttct
aaggcacaagatgaagatgagaagaatgttcctgaagatttccgctgtccgatttcgttc
aagttgatgagtgatccagtcattgtttcttcaggacagacatatgatcgtgactgcatt
aagaaatggctagaagaaggaaactccacgtgtccaaagactcaagcaacgctatcaagc
gacaccgtcacaccgaactatgctctaagaagccttatagctcaatggtgtgaatccaat
ggcatcgaacctccaaaacgtccaaacaatcctcaaccgagtagtaaagcctcctcctcc
tcctcttcctcttcgtcttccttctcacctccttctgatgaacagttgaagatcgaagca
ctcctatgtaagctcacttcacaacgccccgaagagcaaagatccgccgcaggagaaatc
cgcctcctagcaaaacagaacaaccataaccgagtcgtcctcgctgcatcaggcgccatt
cctctgctagtgagtctcctcatgaacttcgatgacccccggacgcaagaacacgccgtg
acgtcggtccttaacctctcgatatttcaagagaacaaaggaagaatcatctctacgttt
ggagcggttccggggatcgttcaagtgctcaagaaaggaagcatggaagctagagaaaac
gcggcggctacacttttcagcctctcggttatagacgagaacaaagtgacgataggcgcg
gcgggagccatccctcctcttgtgaacttgctgagcgaagggtcacagagaggcaagaaa
gatgcagggactgctctgttcaatctctgtatttttcaagggaacaaagggaaagctgtg
agggccggtttagttccggtgctaatgcggttactaacagaaccggagggaagaatggtc
gatgaagcattagctatattggctatactatcgagtcatcctgaagggaaagtagtggtt
ggagcggctgatgctgttccctttatggttgattttattaggagcgggtcgccgcggaac
aaagagaacgcagctgcggtgttggtgcagttgtgttcatgggatccgcagtatttgatt
gaagctgagaagttagggttaatggggtgtttaatagaaatggctgagaatggtactgat
agagggaaacgcaaagcggcacagttacttaactgctttagccgttttaatgaacagcag
aagcagtctggtttgggtgtagagggtcaagtctctctgatctga
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