Brassica oleracea (wild cabbage): 106343037
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Entry
106343037 CDS
T04124
Name
(RefSeq) myosin-16 isoform X1
KO
K10357
myosin V
Organism
boe
Brassica oleracea (wild cabbage)
Pathway
boe04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
boe00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
106343037
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
boe03019
]
106343037
04131 Membrane trafficking [BR:
boe04131
]
106343037
03029 Mitochondrial biogenesis [BR:
boe03029
]
106343037
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
boe04812
]
106343037
Messenger RNA biogenesis [BR:
boe03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
106343037
mRNA cycle factors
P-body specific factors
106343037
Membrane trafficking [BR:
boe04131
]
Others
Actin-binding proteins
Myosins
106343037
Mitochondrial biogenesis [BR:
boe03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
106343037
Cytoskeleton proteins [BR:
boe04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
106343037
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myosin_head
IQ
Myosin_N
nSTAND3
AAA_16
AAA_22
CbiA
AAA_19
ABC_tran
Motif
Other DBs
NCBI-GeneID:
106343037
NCBI-ProteinID:
XP_013637597
LinkDB
All DBs
Position
C4:complement(27689772..27696616)
Genome browser
AA seq
1179 aa
AA seq
DB search
MGENILVDSHVWVEDPEIAWTHGVVLNIKGDEAEVKTNDGKELVAKLSKLYPKDDEAPSE
GVEDMTRLSYLHEPAVLDNLATRYGLNEIYTYTGNILIAVNPFQGLPHLYDAEVMEKYKE
ASFKELGPHVFAIGGIAYREMINEDRNKCILVSGESGSGKTETTKMLMRYLAYFGGHTAG
EGRTVENQVLESNPVLEAFGNAKTVKNNNSSRFGKFVEIQFDDVGRISGAAIRTYLLERS
RVCQVSDPERNYHCFYLLCAAPPEDAERFKLGDPKSFRYLNQSSCYELDGVNDAEEYLAT
RRAMDVVGISETEQDAIFRIVAAILHLGNIEFCKGEDADSSSLKDEQSMFHLQMTSELLM
CDPNSLEDALCKRMMVTPEEVIKRSLDPLGAAVSRDGLAKTIYSRLFDWLVNKINISIGQ
DSHSRRLIGVLDIYGFESFKTNSFEQFCINYTNEKLQQHFNQHVFKMEQGEYEKEEIDWS
YVEFVDNKDVVDLIEKKPGGIIALLDEACMLPKSTPETFSEKLYQTFKNHKRFIKPKLTR
SDFTLVHYAGEVQYQSDQFLDKNKDYVVAEHQDLLNASKCSFVSGLFPPLPKASSKSKFS
SIGARFKLQLQQLMETLNLTEPHYIRCVKPNNLLQPTVFDNANVLHQLRSGGVLEAIRVK
CAGYPTNRTFIEFLKRFIILAPEILKGEYEADDACKWILDKKGLTGFQIGKSKVFLRAGQ
MAELDAHRTKVLGEAAKMIQGQVRTRLTRERYVLLRRASVNIQANWRANLARKISRYMKR
EEAAIKIQKNLRRQIAIKDYGNTKSSAVTLQSGLRTMVARHEFHYKLKSKAATVIQSYWR
GYSAITDYKKLKRASLVYQSKLRGRIARKQLGQSNQADKKKETEHEREVELSNRAEEAVD
KSFVKHSDESGDEDMGHDRETTHSIQEDDGTEKSFVMHSEHSDDGEIRHERETKHTTIQA
DDGIEKSFVMHSEHSSDEEKGHERHTEHTIQADDGIENPFVLDSENLYNNFSDVSHITNP
FRDTEIESLTAEVEMLKALLQVEKQRADISERKCDEARELGERRRKRLEETEKRVYQLQD
SLNRLLYSMSDQFSQLKSILRSTSMSSTMAASAPVVRDDLADSSENSEASSTDSDFTFPA
PSSSSPDNPNQLQVIVQDLSTTEAKGTEIKKEGGFEDYF
NT seq
3540 nt
NT seq
+upstream
nt +downstream
nt
atgggtgaaaacatattggtggattctcatgtttgggtggaggacccggagattgcatgg
actcacggggttgtgcttaatatcaagggagacgaagctgaggttaaaaccaatgatggt
aaagagcttgttgctaaattatcaaaactatatccaaaagacgatgaagctccttcagag
ggagtagaggacatgacacgattatcttatctccatgagcctgcggttctcgacaacttg
gccaccagatatgggctgaatgaaatttatacttatacaggaaacattcttattgctgtc
aatccctttcaaggactccctcatctttatgacgctgaggttatggagaagtacaaggaa
gcctccttcaaagaattgggccctcatgtttttgcaattggtggcattgcatacagggaa
atgatcaatgaggacaggaataaatgtatactggtcagtggtgaaagtgggtctggaaag
acagagacgactaagatgctcatgcgttaccttgcatactttggcgggcatactgcaggt
gaaggacggacggttgagaaccaagtcttagaatcaaatccagttctcgaggcatttgga
aatgcgaagactgttaagaacaacaactccagtcgttttgggaaatttgtggagattcag
tttgatgatgtgggtcgaatatctggggcagccatcagaacctaccttttggagaggtct
cgtgtttgccaagtttcagatcctgaacgcaactatcactgcttttacctcctgtgtgct
gctcctccagaggatgctgagagatttaaattgggggaccctaagtcctttcgctatctt
aaccaatctagctgctatgaacttgatggtgtaaatgatgcagaggagtatcttgccact
agaagagctatggatgtagttggaataagtgaaacagaacaggatgcaattttcagaatt
gtggctgccattctccatcttggaaatattgaattttgcaagggagaagatgctgattca
tcatctctaaaagatgaacagtcaatgtttcatctccaaatgacgtcagaattgctcatg
tgtgatcccaattccttagaagatgctttgtgtaagcgtatgatggtcaccccagaagaa
gttatcaaaagaagtcttgatcctcttggtgctgccgtcagtagggatggtttagcaaag
acaatatactctagactctttgattggttggtaaacaaaataaatatctctatcggacaa
gattctcactctaggcgtttgatcggagtccttgacatttatggttttgagagcttcaaa
accaacagctttgaacaattctgtataaattacacgaatgaaaagctgcaacagcatttc
aaccagcatgtattcaaaatggaacaaggtgaatatgagaaagaagaaatagattggagc
tatgtggagttcgttgataacaaagatgtcgtggatctgattgaaaagaagcccggtggt
atcattgctcttctagatgaagcatgcatgctacccaaatcaactcctgaaacattttct
gagaagctgtatcaaacattcaagaatcataagcgcttcataaaaccaaaattgactcgg
tcagattttacgttagttcattatgcaggggaggttcagtaccagtccgatcaattttta
gacaaaaacaaagactatgttgttgccgagcatcaggatttgttaaatgcttccaaatgt
tcttttgtgtcgggcctttttcctcctcttcctaaagcgagtagcaaatctaagttttcc
tccattggcgctcgtttcaagctacaattgcaacagctgatggagacactgaatcttacg
gaaccgcactacatcagatgtgttaagccaaacaatttgttgcagccaacagtgtttgac
aatgccaatgtcttgcaccaattacgctctgggggtgttcttgaggccatcagagtgaaa
tgcgctggatatccaacaaatagaactttcattgaattcttgaaacgatttatcattctt
gcaccggagattctgaaaggagagtatgaagcagatgatgcatgcaagtggattttggac
aaaaaagggcttacaggtttccaaattgggaaaagtaaagttttccttagagctggtcag
atggctgagctagatgcacacagaacaaaagtgcttggcgaagcagcgaagatgattcaa
ggacaagttagaacccgtctcacaagagaacgatatgtactcttgcggagggcttcagtt
aatatacaagctaattggagagcaaaccttgcacgaaagatatcaaggtacatgaaaagg
gaggaagccgccatcaaaattcagaaaaacttacgtagacagattgcgattaaagattat
gggaataccaaatcttcggcagtcacattgcaaagtggactccggacaatggttgcacgc
catgagttccattataaactgaagtctaaggcagcgactgtgatccagtcttactggcgt
ggttacagtgctataactgactacaagaaactgaaaagagcttctcttgtttatcaaagc
aaactcagaggaaggattgctagaaaacagttgggacagtcaaatcaggctgacaaaaag
aaagagacagaacatgaaagagaggtggaactttccaatcgagccgaagaggcagttgat
aagtcgtttgtaaagcattcagatgaaagtggtgatgaagatatgggacatgacagagag
acaacacattccatccaagaagatgatggaactgaaaagtcctttgtaatgcattcagag
catagcgatgatggagagataagacatgaaagagagacaaagcataccactatccaagca
gatgatggaattgaaaagtcctttgtaatgcattcagagcatagtagtgatgaagagaaa
ggacatgaacgacatacagaacataccatccaagcagatgatggaattgaaaaccccttt
gttctcgattcagagaacctttacaacaacttctctgatgtaagccatataacgaaccct
tttcgtgatacagaaattgagtccctcactgccgaagttgagatgttgaaggccttgttg
caagttgagaaacaaagggctgacatctccgaaagaaaatgtgatgaagctcgagaactt
ggtgagagaagacgcaaacgattagaagaaacagaaaaaagagtttaccaactacaagac
tctttgaacaggttgttatattctatgtcggaccaattctcgcaactgaagtccatcctg
agatctacttccatgtcttcaacgatggctgcttcagcgccagttgtacgtgatgatctt
gctgacagctctgagaactctgaagcttcatcaactgattctgatttcacttttccagct
ccatcttcttcttctccagataatccaaatcagctgcaggttattgttcaagatctatca
accacagaggccaaaggaacagagattaagaaggaagggggctttgaagattacttttga
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