Brassica oleracea (wild cabbage): 106343104
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Entry
106343104 CDS
T04124
Name
(RefSeq) twinkle homolog protein, chloroplastic/mitochondrial isoform X1
KO
K17680
twinkle mtDNA helicase [EC:
5.6.2.3
]
Organism
boe
Brassica oleracea (wild cabbage)
Brite
KEGG Orthology (KO) [BR:
boe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
boe03029
]
106343104
Enzymes [BR:
boe01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
106343104
Mitochondrial biogenesis [BR:
boe03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial DNA replication factors
Mitochondrial DNA maintenance factors
106343104
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Toprim_4
DnaB_C
Toprim
Toprim_2
AAA_25
Toprim_3
AAA_29
MeaB
Motif
Other DBs
NCBI-GeneID:
106343104
NCBI-ProteinID:
XP_013637692
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All DBs
Position
C5:20318990..20323333
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AA seq
709 aa
AA seq
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MRFLLRLPQTHLRKLSSSMSVLMGSKQFLEFCLLPSFAASSPSCTRGAQRQLSSVSRRFR
PVLASRPVSKSSPYHQRPNGVSPYTSISRAPNPVDPEDGAVQSRLANLRLKLADNGIDAQ
NCPSGQYSGLICPECEGGDSGEKSLSLFIAADCSSATWNCFRGKCGLKGGVRVDGRFATS
VVPMEKAERKVTVESLELEPLCDEIEDYFAARMISAETLKRNRVMQKRIGDEIVIAFTYW
QRGELVSCKYRYLTKKFFQEKNTRRIFYGLDDIEKSSEIIIVEGEIDKLAMEEAGFRNCV
SVPDGAPASVSSKETPSEEKDTKYKFLWNCNDYLKKASRIVIATDGDGAGQALAEEVARR
LGKERCWRVKWPKKSEDEHYKDANEVLMSMGPHSLSEAVRSAEPYPIQGLFSFKDFFDEI
DAYYHRTHGHEYGVSTGWKTLDNFYSVSVVVPGELTVVTGVPNSGKSEWIDALLCNLNHS
VGWKFALCSMENKVRDHGRKLLEKHVKKPFFDADYGRSVPRMSVEELDEGKLWLDDTFTL
IRCELDSLPSIGWVLERAKAAVLRHGIRGLVIDPYNELDHQRTQRQTETEYVSQMLTKIK
RFAQHHSCHVWFVAHPKQLQQWDGGPPNLYDISGSAHFINKCDNGIVIHRNRDEKAGPLD
LVQICVRKVRNKVAGQIGDAYLCYDRATGLFSDSPITPEKPERRSSRRP
NT seq
2130 nt
NT seq
+upstream
nt +downstream
nt
atgcgtttcttgcttcgtcttcctcagacccacctgcggaaactgtctagttcgatgtca
gtactcatgggttcgaagcagttcctcgagttttgtcttcttccttcttttgcagcttct
tctccttcttgcacccgtggtgctcagaggcaactctcttccgtttctagaagatttcgt
ccggttctagcctcgagacccgtgtccaaaagcagcccttatcaccaaaggcccaatggt
gtatccccctacacttcaatctccagagccccaaatcctgttgatcctgaagatggtgct
gtgcagtctagattagccaacttgaggcttaaattggctgataatggaattgatgctcag
aactgtccctccggacaatacagtggtttgatatgtcccgagtgtgaaggtggtgactct
ggagaaaagagcttgtctcttttcattgctgctgattgttcttcggctacatggaactgc
tttcgagggaagtgtgggttgaaaggtggagtacgggtggatggtaggtttgcaacatct
gtagttccaatggagaaggctgaaagaaaagttacggtggagagtttagagctagaacct
ctctgcgatgagattgaggattatttcgctgcaagaatgatttcggcagaaacactcaag
agaaatcgggttatgcagaaaagaataggtgatgagattgtaattgcttttacttattgg
caaagaggggagcttgtgagttgcaagtaccgttatctaactaagaagttctttcaggaa
aagaatacacggaggatcttttatggtcttgacgacattgagaaatcatctgaaatcatt
atagttgaaggggaaatagacaaacttgcgatggaagaggcaggtttccgaaattgtgtg
tccgttcctgatggagctccagcgtctgtttcttcaaaggaaactccatctgaagagaag
gacaccaagtataagttcctatggaattgcaatgactacttaaagaaggcatctcggatt
gttattgctactgatggagatggagctggtcaagctctggctgaagaagttgcacggcgt
ctggggaaagaaagatgctggcgtgtcaaatggccgaagaaaagtgaagatgagcattac
aaagatgcaaatgaggtgcttatgtcaatgggacctcattcactcagtgaagctgttcga
agtgcggagccataccctatacaaggattgttctccttcaaagatttctttgacgaaatt
gatgcctattatcatcggactcatggacatgagtatggtgtttcaaccgggtggaaaact
ttggacaacttctatagtgtaagcgttgttgtgccaggggagttgacggttgtgacaggg
gttcctaattccggaaagagtgaatggattgatgctctcttatgtaatctcaaccatagt
gttggctggaagtttgctctctgctcaatggaaaataaagtacgagatcacggcaggaaa
cttttggagaaacatgtaaagaaacccttctttgatgcagattatgggagaagtgtccca
cggatgagcgttgaggagttggatgaagggaaactgtggttagatgacaccttcacactc
ataagatgtgaattggattcacttccaagtatcggatgggttttggaacgtgcgaaagct
gctgttcttcggcatgggatacgaggacttgtcatagacccttacaatgagcttgatcat
caacgtactcaaagacagacggagacagaatatgtcagccagatgctaacgaagataaaa
cgatttgcgcaacatcactcctgtcatgtctggtttgttgcacatccaaaacagttgcaa
cagtgggacggaggtccaccaaacctttatgatattagcgggagtgcacatttcattaac
aaatgtgacaatgggattgttattcacagaaaccgtgatgaaaaagctggacctcttgat
ctagtgcagatttgtgtgaggaaagtgcgaaacaaggttgcaggacaaattggtgatgca
tacttgtgttacgacagggcaactggtttattctcagattctcctataacacctgagaag
cctgagaggagatcaagccgacggccatga
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