Brassica oleracea (wild cabbage): 106343357
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Entry
106343357 CDS
T04124
Name
(RefSeq) LOW QUALITY PROTEIN: geranylgeranyl pyrophosphate synthase 10, mitochondrial-like
KO
K13789
geranylgeranyl diphosphate synthase, type II [EC:
2.5.1.1
2.5.1.10
2.5.1.29
]
Organism
boe
Brassica oleracea (wild cabbage)
Pathway
boe00900
Terpenoid backbone biosynthesis
boe01100
Metabolic pathways
boe01110
Biosynthesis of secondary metabolites
Module
boe_M00366
C10-C20 isoprenoid biosynthesis, plants
Brite
KEGG Orthology (KO) [BR:
boe00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
106343357
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
boe01006
]
106343357
Enzymes [BR:
boe01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
106343357
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
106343357
2.5.1.29 geranylgeranyl diphosphate synthase
106343357
Prenyltransferases [BR:
boe01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
106343357
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
Motif
Other DBs
NCBI-GeneID:
106343357
NCBI-ProteinID:
XP_013637992
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All DBs
Position
C5:34195126..34196620
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AA seq
266 aa
AA seq
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MRYTLLSGGKCVRPMLCLAACELVGAQESIAMPTACAVEMLHASSLIQDDLPCMDDDNLR
RGKPTNHKVYGEDISVLTADGLIALAVKKMAASTFLGVPPERVLRAILEMTKALGTEGLV
AGQAADLAGEGMSGVGLEHLEFIHINKTAALLEASAVVGAIVGGGSDEEIERLRKYARCI
GLMFQVVDDVLDVTKSSELGKTAGSXDLVAGKLTYPRFLGVEKSKEYADFISHYARSRCH
VSMVQNLYIKSQKILGFTVKIEYTTK
NT seq
801 nt
NT seq
+upstream
nt +downstream
nt
atgaggtacacacttctctcgggtggaaaatgtgtaaggccaatgctttgcttagctgcg
tgcgagctcgtaggcgcccaagagtctatcgcaatgcccactgcatgtgcggttgagatg
cttcacgcgtcatctctcatccaagacgacctcccttgtatggatgacgacaaccttcgt
cgaggaaaacccaccaaccataaagtatatggtgaagatatatccgtcttgaccgctgat
ggactcatagctttggctgtcaagaagatggccgcgtctacctttttgggcgttcctcca
gagagggttctccgggccattctggagatgacaaaagcgttgggaacggaagggctcgtt
gcgggtcaagcggctgatctggccggagaaggaatgagcggagtggggttggaacatctt
gagtttatacatattaacaaaacggcggcgttgcttgaagcttctgcggtggtgggggct
atagtgggaggtgggtctgatgaagagattgaaaggcttaggaagtatgcaagatgcatt
gggcttatgtttcaagttgtggatgatgttcttgacgtgacaaagtcgtcggagttgggg
aagactgccggttcatgagatttggtggccggaaagctaacgtatccgaggttcttggga
gtggagaagtcgaaggagtatgcggactttattagtcactacgctaggtctagatgccat
gtcagtatggtacaaaatctgtatatcaaaagccaaaagatattaggtttcacagttaaa
atagagtatacaacaaagtaa
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