Brassica oleracea (wild cabbage): 106343433
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Entry
106343433 CDS
T04124
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1 isoform X1
KO
K14440
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1 [EC:5.6.2.-]
Organism
boe
Brassica oleracea (wild cabbage)
Brite
KEGG Orthology (KO) [BR:
boe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
boe03036
]
106343433
Chromosome and associated proteins [BR:
boe03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
106343433
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
HARP
Motif
Other DBs
NCBI-GeneID:
106343433
NCBI-ProteinID:
XP_013638091
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Position
C5:complement(23653200..23658506)
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AA seq
684 aa
AA seq
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MDDDDFDLTMEEMDALEKEALERINQNKVLAFSIFLVLTLGINLVFSPNVCFSFAQVPNL
SQGSRILPSSLAPKPNTGEGVKVPVKILLHHSGDLAAKFPYNQAVVDAVRKIPMALWNAK
ERLWIFPQSSLSSAEIILRQVSSVKVEVENLDPLVQRAIASASRVPDLRHLYDKIPSHIE
PKLLPFQRDGIEFILQHGGRVLLADEMGLGKTLQAIAVTTCVQESWPVLIIAPSSLRLHW
ATMIHQWLHVPPSDIVVVLPQPGGSNKCGFTIVSSNTKGTIHLDGVFNIISYDVVTKLDK
LLMALDFKVVIADESHFLKNAQAKRTTATLPVIKKAQYAILLSGTPALSRPIELFKQLEA
LYPDVYRNVHEYGSRYCKGGVFGIYQGASNHEELHNLMKATVMIRRLKKDVLSELPSKRR
QQVFLDLAEKDMKQINALFRELKVVKAKIKDCMSEDDIKSLKFTEKQLINKIYTDSAEAK
IPAVTDYLGTVLEAGCKFLVFAHHQSMLEALHQFLKKKKVGCIRIDGSTPASSRQVLVSD
FQGNDEIKAAVLSIRAAGVGITLTAASTVIFAELAWTPGDLIQAEDRAHRIGQVSSVNIH
YLLANDTVDDIIWDVVQSKLENLGQMLDGQENALEVSSSHVMNSPLKPRNSPSKQQTLDP
FLKRCKRSLYDDTEEHPTPKVPRN
NT seq
2055 nt
NT seq
+upstream
nt +downstream
nt
atggatgatgatgactttgatttgaccatggaagagatggatgccctagaaaaagaagct
cttgagagaatcaaccagaacaaggttctcgctttctcaattttccttgtccttacgttg
gggattaatctcgtgttcagccctaatgtgtgtttttcttttgctcaggttcctaatttg
tctcaagggtccagaatcttaccttcatctctcgcccctaaaccaaacactggtgagggc
gttaaggtccctgtgaagattttgctgcatcatagtggagatcttgctgcaaagttcccc
tataaccaggcggtggtggatgctgtgcgtaaaatccctatggctctttggaatgctaaa
gaaaggttatggatctttcctcaatcttcattgtcatcagcagaaattattctacgacaa
gtttccagcgttaaagttgaggtagagaacttagatcctcttgtgcaacgtgcaatagct
tctgcctcaagagttccagatctacggcatctgtatgacaagataccaagccacattgag
ccaaagcttcttccgtttcagcgagatggcatagagtttatattgcagcacggagggcgt
gtgctcctagcggatgaaatgggtctgggaaagactctgcaggcaattgctgtgactaca
tgcgttcaagaatcttggccagttctgattattgcaccatcttccttacgtttacattgg
gcaacgatgattcaccaatggctgcatgtacctccgtcagacatagttgtagttttaccg
caaccaggtggatcaaacaagtgcggatttactatagtttcctcgaatacaaagggcaca
atccatcttgatggtgtcttcaacattatctcttacgatgtggtcaccaaactggacaaa
ctcctgatggcgttggactttaaggttgtcatagcagatgaatcacattttcttaaaaac
gctcaagcaaagaggacaactgctacccttccagtcataaagaaagctcaatatgcaatc
ctactgagtggaactcctgctttatctagaccaatagagctattcaaacagctggaagct
ctatacccagatgtatatagaaacgttcatgaatacggtagcagatactgcaaaggcggg
gtttttggaatatatcaaggcgcaagcaatcatgaagagttgcacaatttgatgaaggca
acagtaatgattcgaagacttaaaaaggatgtcttgtctgaacttccgtcaaaacgaaga
cagcaggtcttcttagatttagccgagaaagacatgaagcaaatcaatgctttgtttcgt
gagctaaaggttgtaaaggcaaaaattaaggattgcatgtcggaagatgacatcaaatct
cttaaatttacagagaagcaacttatcaataagatctacactgattccgctgaagccaaa
atcccagcagtgactgattatctaggaactgtgcttgaggctggttgcaaatttctagta
tttgctcatcatcagtccatgcttgaagcattacaccagtttctaaaaaaaaagaaagtg
ggctgcatccggattgatggaagtacccctgcctcctctagacaagtattggtttcagac
tttcaggggaacgatgagataaaagcagcagtgctgtcaatacgagctgctggtgttggg
ataactttgacagcagcaagcactgttatctttgcggagttggcatggactccaggtgac
ctgatacaggcagaagatcgtgcacataggattggtcaagtctcctcagttaacatacac
taccttctagcaaatgacactgttgacgacatcatctgggatgtcgttcagagcaagctg
gagaatctgggacagatgcttgatggacaagagaatgctctggaggtttcatctagtcat
gtgatgaacagtccactaaaaccgagaaacagcccctcgaagcagcaaactctagacccg
ttcttgaagcgctgcaagagatcattatatgatgacactgaagaacatccgacgcctaaa
gttcccagaaactga
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