Brassica oleracea (wild cabbage): 106343810
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Entry
106343810 CDS
T04124
Name
(RefSeq) serine/arginine-rich splicing factor SR30 isoform X1
KO
K12890
serine/arginine-rich splicing factor 1
Organism
boe
Brassica oleracea (wild cabbage)
Pathway
boe03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
boe00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
106343810
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
boe03041
]
106343810
Spliceosome [BR:
boe03041
]
Common components
Common spliceosomal components
SR proteins
106343810
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
RRM_YTH1
RRM_7
Nup35_RRM_2
RRM_3
Motif
Other DBs
NCBI-GeneID:
106343810
NCBI-ProteinID:
XP_013638587
LinkDB
All DBs
Position
C5:complement(3475536..3478485)
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AA seq
245 aa
AA seq
DB search
MSSSRWNRTIYVGNLPGDIRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFVEFEDPRDAD
DAIYGRDGYDFDGCRLRVEIAHGGRRGSSSVDRYSSGSRAPSRRSDYRVLVTGLPPSASW
QDLKDHMRKAGDVCFSEVFRDRGGMSGVVEYSNYDDMKYAIRKLDDSKFRNAFSRSYIRV
REYESRSVSRSPYYSRSRSRSYSYSSRSLSRSPTPRPRSPTPYSSISRSRSRSRSDSPVS
PVRSD
NT seq
738 nt
NT seq
+upstream
nt +downstream
nt
atgagtagcagccgatggaaccgcacgatctacgtcgggaacttgcctggcgatattcgc
atgcgagaggttgaagatctcttctacaagtatggacccattgtggacattgatctgaag
attccaccgagacctcctggttatgcattcgtcgagtttgaagatcctcgtgatgcagat
gatgctatttatgggcgggatgggtatgattttgatgggtgtcgactacgggttgagatt
gcacatggtggtcgtagaggttcatcctcggtggataggtacagcagtgggagccgtgca
ccttcgaggcggtccgactatcgtgtgctggtgacgggattaccgccatctgcttcctgg
caagaccttaaggatcacatgcgtaaagctggagatgtctgcttttctgaagtttttcgt
gaccgtggaggcatgtcaggggttgtggagtatagcaactatgatgatatgaaatacgcg
ataaggaagcttgatgactctaagtttcgaaatgccttctctagatcttatatacgggtg
agagaatatgagtcgaggagtgtgagtcgcagcccatactattctagaagcaggagtcga
agctatagttatagtagcagaagtttgtcgcgttctccaacgccccgtcctcgttctcca
actccgtatagctcgatctcaagatcccgatcaagatcgagatcagattctcctgtttca
cccgtgaggtctgattga
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integrated database retrieval system
