Brassica oleracea (wild cabbage): 106343899
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Entry
106343899 CDS
T04124
Name
(RefSeq) autophagy-related protein 13
KO
K08331
autophagy-related protein 13
Organism
boe
Brassica oleracea (wild cabbage)
Pathway
boe04136
Autophagy - other
Brite
KEGG Orthology (KO) [BR:
boe00001
]
09140 Cellular Processes
09141 Transport and catabolism
04136 Autophagy - other
106343899
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
boe04131
]
106343899
03029 Mitochondrial biogenesis [BR:
boe03029
]
106343899
Membrane trafficking [BR:
boe04131
]
Autophagy
Autophagosome formation proteins
ULK complex
106343899
Atg1 complex
106343899
Mitochondrial biogenesis [BR:
boe03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
106343899
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG13
Motif
Other DBs
NCBI-GeneID:
106343899
NCBI-ProteinID:
XP_013638707
UniProt:
A0A0D3CIR4
LinkDB
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Position
C5:35929562..35932475
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AA seq
598 aa
AA seq
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MNRSSNSEGAKAEQIIFEFFAKTLHIILESRTPFMSSRNFSSSGEQMICSPSSSSSSSSS
VRPRDKWFNLALRECPAALESFDIGRRSTLEPLVVDVVLVARAFDQMNSPGGRELIRNFS
GKEYNSDQDDCETKNEQIIERWLVQYDNRKVRERRSSSSNNNKLQVMYKKATLLLRSLFV
MVRLLPAYKIFRELNSSGQIFKFKLVPKVPTIVEPFTRIEEAEMQKFAFTPVDTICGRLC
MSVLYRSLSDVSCSQQSAPVSPTFITDYVGSPLADPLKSFPSLPLSYGSPPLMSFQRRHS
WSFDRYKASPPSVSCSPSPTRSDSQALVTNPCSRRLPPHPCQDFTPPCSPSAHAQAFPRS
ITRTESAPVRIPAPTFESKQNVVVPPSSHLKLSRHASLKPVRNTGPVESGAALEKMHIYG
REDFRRNSGVKLSSNSSPRISFSRSSSRSYQDGFDDTDFPCPFDVEYDEITDSSSSRPGS
FEQRGDAHEPPPLESSGSYPKKSQDAAVGALVNMLKKAPPLRQDVSESSIPELCWKNNKN
KPGGGQEIATASMTASGIALAAKTTADALEELRSYKEMKNVLLSESTKDSSPFAVSES
NT seq
1797 nt
NT seq
+upstream
nt +downstream
nt
atgaacaggagtagcaactccgaaggtgccaaagcagagcagatcatattcgagttcttc
gctaaaaccctccacatcatcctcgaatcaaggactcctttcatgtcttcaagaaacttc
agtagtagcggcgagcagatgatctgctcaccttcctcatcttcttcgtcttcctccagc
gtcaggcctcgtgacaaatggttcaacttagctctcagggagtgtcctgcagccttggag
agcttcgacatcggccgcagaagcactttagagcctttggttgtcgatgtggttcttgtt
gcaagggcatttgatcagatgaattctccaggtgggagagagcttatcaggaacttctcc
gggaaagagtataactctgatcaagatgattgtgaaaccaagaacgagcagatcattgag
agatggcttgtgcagtatgataataggaaggttagggaaaggaggtcaagtagtagtaat
aataataagctgcaagtgatgtataagaaagcaactttgcttctgagatcactctttgtg
atggttaggcttttacctgcttacaagatcttcagagaactcaactcatctggacagatc
ttcaagttcaagcttgtccctaaggttccaaccatagttgagccatttactcgtatagaa
gaggcagagatgcagaagtttgctttcacgccggttgataccatctgcggtaggctttgc
atgtcggtgttgtatcgatctctctcagacgtcagctgcagccaacagtcagctcctgtg
tctccgacgtttatcaccgattacgttggaagtcccttggctgatcctttgaaaagtttc
ccttctctgcctctttcttatggttcgccgccgttgatgtcgtttcagaggcgtcatagc
tggagttttgataggtacaaggcctctccaccttcggtctcttgctcaccgtcgcctaca
cggtctgattcacaagcgttggttactaatccttgttctcgtcgccttcctcctcatcct
tgtcaagattttactcctccttgttctccttcagcacatgcacaagccttcccaagaagc
atcacgcgtactgaaagtgctccagttaggattccagctcctacttttgagtctaaacag
aacgtggtggtgccaccttcttctcatttaaagttgtcgagacatgcttctttgaagcct
gtgagaaacactggtcctgttgaatctggagcagcgttggagaagatgcatatctatggg
agggaagactttaggaggaactctggggtgaagctatcatccaacagctcaccgaggata
tcattttctagaagttcaagtagatcataccaagatggttttgatgatactgattttcct
tgtccatttgatgttgagtatgacgaaattacagattctagtagtagcagaccaggctcc
tttgaacagagaggagatgcacatgaaccaccaccactcgagtcgagcggttcataccca
aaaaagtcacaagatgcagcagtcggtgctctagtgaatatgctgaagaaagctccacct
ctcagacaagacgtctctgaatcttccatacctgaactttgttggaagaacaacaagaac
aaacctggagggggtcaggagatagcaacggcgtcaatgacagcgtcagggatagctctg
gcggcaaagacaacagctgatgccttggaagagctgaggtcttacaaagaaatgaagaat
gtgttacttagcgaatccacaaaggactcctcaccctttgctgtttcagaatcttga
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