Brassica oleracea (wild cabbage): 106344173
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Entry
106344173 CDS
T04124
Name
(RefSeq) methyl-CpG-binding domain-containing protein 9-like isoform X1
KO
K22768
methyl-CpG-binding domain-containing protein 9 [EC:
2.3.1.48
]
Organism
boe
Brassica oleracea (wild cabbage)
Brite
KEGG Orthology (KO) [BR:
boe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
boe03036
]
106344173
Enzymes [BR:
boe01000
]
2. Transferases
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.48 histone acetyltransferase
106344173
Chromosome and associated proteins [BR:
boe03036
]
Eukaryotic type
Histone modification proteins
HATs (histone acetyltransferases)
106344173
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PHD
MBD
WHIM1
WSD
FYRN
FYRC
PHD_2
Phage_zn_bind_3
PHDvar_NSD
DUF7028
Bromodomain
C1_2
zf-met
Motif
Other DBs
NCBI-GeneID:
106344173
NCBI-ProteinID:
XP_013639069
LinkDB
All DBs
Position
C1:43723982..43732901
Genome browser
AA seq
2139 aa
AA seq
DB search
MELTDSTKKQLGETRSAALDEDNRSFLGIDLNEIPTGATPGGAVQDDDGEYEPVEVVRSI
HDNPDPAPGAPAEVPEPDRDAACGACGRPESMELVVVCDACERGFHLSCVNDGVEAPPSA
DWMCSDCVAGGGRSKLWPLGVKSKLILDMNASPPSDAEGYGGEDPSDSRKHMLAMGNSFE
HSMTHSSFLDPGRALTLDFGFPSNLGNSSLPIRFPSLDPSELLLQNLRHFISERHGVLED
GWHVEFKQPLNGYHLCAVYCAPSGKTFSSIQDVAFYLGLATNGNHSCMDTDIRNESSLLQ
ERLNMPKRRKTSRWPTNNFPDQKGSSMSAQLSRFPYNGQTMPPFAISSGTLFQASESLSS
RNNGCGCEEANVSKGLPMQFEDFFVLSLGRIDIRQSYHNVNMIYPIGYKSCWHDKITGSL
FTCEVSGGSSGPVFKITRSPCSKSFVPVGSTVFSCPKIDEMVEQNIDKRGDRRDSIQEHD
DDTVEILLSDPSPPLGDDILSCLQEKSFSSTFYCLRSEVGSSQVDLNNTLSYNQQHEVEI
GDIIVEEDSLSVAWQKVSQKLVDACSNVLKHKGTMNFRCKHVDRETREINWDTRNEKDNV
ILSLSRFCCSLAPHSATCGGKDNSEIASLVDVLSRWLDQSRFGLDADFVQEMIERMPGVE
SCSNYRSLKTRSSSVSVTVAEGALIAKPKVGENVREEVFGEISRKAKRHKLNGGHGFSNP
HPPPGRPMCLRLPPVVVGDFLQVSEVFWRFREILGLGEAFSPEKLEQEIVNPVFDGLFLD
KSGKEVNRSEMNISDKDRTPTKVLSLLDESRQPFSSGNTFASVLKETKAGDSTEFNISNS
SRGPCVGALLTKTHISLLQVLICELQSKVAAFVDPNFDSGESRSRRGRKKDDSTLSAKRN
KLHMLPVNEFTWPELARRYILSLLSMDGNLESAEIAARESGKVFRCLQGDGGLLCGSLTG
VDGMEADSMLLAEAIKKIFGSLTRENDVLSVEDDDSDGLDATETNACNGDIPEWALVLEP
VRKLPTNVGTRIRKCVYDALERNPPEWAKKILEHSISKEVYKGNASGPTKKAVLSLLADV
RGGDLVQKSVKGTKKRTSIGVSDVIMKKCRAVLRDVAAVDEDKVFCTLLGRKLLNLNDND
DDGLLGSPAMVSRPLDFRTIDLRLAVGAYDGSTEAFLEDILELWSCIRVMYADQPDSLEL
VETLSKKFKSLYEAEVLPLAQKLMDYRKLECLSAEMRKEIKDIVVSVNKLPKAPWDEGVC
KICGVDKDDDSVLLCDTCDAEYHTYCLNPPLIRIPDGNWYCPSCVIAKRMAQDALESNKL
VRRRKGRKYQGELTRASMETAARLVDVMDEKDYWEFSAEERILVLKLLCDELLSSSLVHQ
HLEQCAEALIEMQQKLRSLSSEWKNTKLRQEFLTAKLAKVEPSILKEMGEPQNSSSFADH
HGRHQQQENVGDRIPHDDGTSSAAFLTNNQGKAPIETHAQTRGSNVISSENKIPTPEKVT
SPGRNELPIEVTEHMSCEIEDTTETLYKSVGKNRETHTINPNAVELKTAHDASSLASQEL
QACRQDLNATSNEIQNLQQSIRSIESQILRQSIRRDFLGSDGSGRLYWGCYFAEEHPRIL
VDGSMSLQKAVQVDLTGSKVPSPFLHAVDHGRLMVSPWTYYETEAEISELVLWLHDDDPK
ERELRESIMCWKRLRFGDLQREIKQAENSSSPIMAGDLVTKAAMAMEKRYGPCIKLEIET
YKKRGKKTKFAEREKLCRCECLESILPSMIHCLICHKTFASDDEFEEHAESKCVPYSLAT
EEGKEKSDSSKAKESLKSDYLSVKSSAGKDKAEISNVSELGSGLIRYQEEESISPYHFEE
ICSKFVTKDSNRDLVKEIGLISSNGSPTFIPLPSIHLNDAMLISATCNKLDGGDSGDQVI
FTGSEANGEGLNSESLDRSVTDDLGNPLNKLSGMGFDNSEEKNKKSTGSGLKGCCVVPQA
SLKRVTGKALPVFRFLKTNLLDMDVALPEEALRPSKSHPDRRRAWRAFVKSAQSIFELVQ
AAIVVEDMIKTEYLKNEWWYWSSLSAAAKISTLSALSLHIFSLEAAIMYDKGITQSDPMD
ETKEIGLQEQKSQRVTDPQERSSRANRRSGKKRKEPEGA
NT seq
6420 nt
NT seq
+upstream
nt +downstream
nt
atggaactcactgattctacgaaaaagcaactcggagagaccaggagcgccgctctcgac
gaagataatcgctcctttctcggcatcgatcttaacgaaatccctaccggcgctactccc
ggcggcgctgttcaggacgatgacggagagtatgaacccgttgaagttgttaggtcaatt
catgataatccggacccagcgcctggagcccctgcagaggttcctgagccggatcgggat
gccgcgtgcggcgcctgtggaaggccggagtcgatggagctcgtagtagtctgcgacgct
tgtgagcgagggtttcatcttagctgtgttaacgacggagtggaggcgcctccttccgcc
gattggatgtgcagcgactgtgttgccggcggcgggaggagcaaactgtggccgttgggg
gtgaagtccaagctcatcctggatatgaacgcctcgccgccgagtgatgccgagggatac
ggaggcgaggatccatcagattcgagaaagcatatgctggccatggggaactcttttgaa
cattcaatgacgcattcaagctttctggatcctggtagagcacttactttagattttggc
ttcccatcaaacctcggcaacagtagtttgcccatcagattcccatccttggatccaagc
gagctcttattgcaaaatctcaggcatttcatatctgaaaggcacggagttttagaagac
ggttggcatgtcgaatttaaacagcctttaaatggctatcatctctgtgcggtgtattgt
gctccgagtggaaaaacatttagttcaatacaagatgttgctttttatctcggcttggca
actaatggtaaccacagctgtatggatactgatatcaggaatgagagttctcttcttcaa
gaaagattgaatatgcccaagagaagaaagacatcaagatggccaaccaataatttccct
gaccaaaagggtagttcaatgagtgctcagctcagtcgttttccatacaatggtcagacg
atgcccccttttgccatttcatctggtactctttttcaggctagtgaatctcttagctct
aggaataatggatgcggttgtgaggaagctaatgtaagtaaaggacttcctatgcaattt
gaagatttctttgtcctctcgcttggacgaattgacataagacagtcttaccacaatgtc
aacatgatttatccaataggatataagtcctgctggcatgataaaatcacagggtcttta
tttacttgtgaagtatctggtggtagctctggccctgttttcaagattacacggtcacca
tgctctaaatcatttgttccagttggatcaactgtcttctcctgcccaaagattgatgaa
atggtggaacagaacattgacaaacgaggtgatcgaagagacagtattcaagaacatgat
gatgacactgttgaaatccttctttcagatccatccccaccacttggagatgatatattg
tcttgtttacaggagaagagtttctccagtacattctattgcttgcgctcggaagttggt
tcttcgcaagtagacttaaataatactctatcctataatcagcagcatgaggttgagatt
ggcgatattattgtggaagaagattcattgtctgttgcatggcaaaaggtgtctcaaaaa
cttgttgatgcatgttccaatgtcctgaagcacaagggtaccatgaacttccgttgcaag
catgttgacagagaaacgagggaaatcaactgggatacaagaaatgagaaagacaatgtg
attttatctttgtcaagattttgctgttctttggctcctcacagtgctacatgtggtgga
aaggataatagcgagattgcatctctagttgatgttttgtcaaggtggctggatcaaagc
aggtttgggcttgatgcagattttgtacaggaaatgattgaacgtatgcctggtgtcgaa
tcatgttcaaattataggtctctgaagactagaagttcttctgtttctgtaactgtagca
gaaggagcgcttattgccaaaccaaaagttggagaaaatgtcagggaagaagtttttggt
gagatatctcggaaagccaaaaggcataaactaaatggtggtcatggtttcagcaatcca
caccctcctcccgggaggcctatgtgtttgaggcttcctcctgtggttgttggtgacttc
cttcaggtatctgaagtgttctggcgtttccgtgaaattttgggtttgggagaggctttc
tcacctgagaagcttgaacaagagattgtcaatccagtgttcgatggtttgtttcttgat
aaatctgggaaagaagttaatagaagtgagatgaacattagtgataaggatcgtacacct
actaaagttttgtctttgttggatgaatctcgccaacctttttcttcgggaaataccttc
gcttctgtactaaaagagacgaaagcaggggattctactgagttcaacatttcaaattcc
tctcgtgggccgtgcgtgggtgcacttctaacaaagactcacatttcgcttctgcaagtg
ctaatatgtgagttgcaatccaaggtagctgcatttgttgatccaaactttgattctgga
gaatcaagatccagacggggacggaaaaaggatgacagtacactttctgctaaaagaaat
aagctgcatatgcttcctgttaacgagttcacatggcctgaattggcccgtaggtacatt
ttatctcttttatcaatggatgggaacctcgaatcagcggagattgctgctcgtgaaagt
ggtaaggtattccgttgcttacaaggggatggtggtttgctctgtggttcacttacagga
gtggatgggatggaagccgattcaatgttacttgcagaggctattaaaaaaatatttggt
tctttgacaagagaaaatgatgttctctctgtggaagatgatgattctgatggccttgat
gctactgagacaaacgcttgcaatggtgatattccagaatgggcactggttctggaacct
gtgagaaagcttccaacaaatgttgggactagaatcagaaagtgtgtctatgatgcttta
gagagaaatccaccagagtgggcaaagaagatattagagcattccatcagtaaagaagta
tataaaggcaatgcatcaggaccgacaaagaaagctgtcctctcattgctagccgatgtt
cgaggtggtgatttggtgcagaagtctgtcaaaggaaccaaaaagaggacgtctattggt
gtttctgatgtcattatgaagaaatgtcgtgctgtgctgcgtgatgttgcagctgtagac
gaggataaagtgttttgtactttattggggcgaaagttactgaatttaaatgataatgat
gatgacggactcttgggatcacctgcaatggtttcgcgtcccctagactttagaactatt
gatttgcggttggctgtcggtgcgtatgacggatcaactgaagcttttcttgaggatatt
cttgagctgtggagttgtatacgtgttatgtatgcggatcagcctgattctttagaactg
gttgaaacattgtctaaaaaatttaagtcactatacgaagctgaggttctaccacttgct
cagaaacttatggactacagaaaattggaatgtctaagtgcagagatgaggaaggaaatt
aaggacattgttgtttcagtaaataagcttcccaaggccccgtgggatgagggggtatgt
aaaatatgtggcgttgacaaagatgatgacagtgttctcttgtgtgatacatgcgatgcg
gagtatcacacatattgtttgaatccccctcttattagaattcctgatggaaattggtat
tgtccctcatgtgtcattgccaagcgcatggctcaagatgctttggaatcgaacaaacta
gtcagacggcggaaaggtagaaagtatcagggggaacttacccgagcttctatggaaaca
gctgctcgtctggtagatgtgatggacgaaaaagactactgggagttcagtgctgaggag
agaatcctggtgcttaagcttctatgcgatgaactgcttagctcatcccttgttcatcaa
catctcgagcagtgtgccgaagccttaattgaaatgcagcagaagttgcgctctctttcc
tcagaatggaaaaacacaaaattgcggcaagaatttctgacggctaaactcgcaaaggtt
gaaccaagtattctaaaggagatgggcgaaccacaaaattcaagtagctttgcagaccac
catggacgtcatcaacaacaggagaatgttggagacaggattcctcatgatgatggcacg
tcctctgctgcgtttcttaccaataatcagggaaaagctccgattgagacccatgctcaa
actagagggtcaaatgtcatttccagtgagaacaaaattcccaccccagaaaaagttaca
tcccctggaaggaacgagttgccaatagaggtaacggagcatatgtcttgtgaaatagaa
gataccacagagaccttgtacaaatcagttggaaagaaccgtgaaacacacactataaat
cccaatgcggtggaattgaagacagcacatgatgcatcttctctggcttcccaagagttg
caggcttgtcgacaggatttgaatgccactagtaatgaaatacagaatctgcagcaatca
atcagaagcatagaatcacagattctaaggcaatctatacgaagagactttctgggaagt
gatggtagtggtcgtctatattggggttgctacttcgcagaagaacatcctcgtattttg
gttgatggaagcatgtcgttgcagaaagctgtacaagttgatttgacaggttcaaaagtt
ccctccccatttctccatgccgttgaccatggaagactaatggtctcaccctggacatat
tacgaaactgaagcggagattagcgagcttgtcctatggcttcatgatgatgacccaaaa
gaaagagagctgagagagtctattatgtgctggaaaaggttacgatttggggatcttcaa
agggaaatcaaacaagctgagaattcgtcctctccaataatggctggggatcttgtgacc
aaggctgccatggcaatggagaagagatatggtccatgcatcaaactagagatcgaaacc
tataaaaaacgggggaagaagacaaagtttgcagagcgagagaaactgtgtagatgcgaa
tgcttggaatccattttgccatccatgattcactgcctcatatgccacaaaacatttgca
agtgatgatgaatttgaggagcacgccgagagtaagtgtgttccttattcattagcaact
gaagaaggcaaagaaaaatctgattcttcaaaagcaaaagaaagcctgaaatccgattat
cttagtgtaaagtctagcgctggcaaagataaagctgaaatatccaatgtttctgaactt
ggttctgggttgataagatatcaagaagaagaatctatttccccgtaccattttgaggag
atctgctccaagtttgtgacaaaggattctaacagagatttggttaaagagattggtctg
atcagttcaaatggaagtccaacatttattccgttgccatctattcatcttaacgacgca
atgctcatatcggccacttgcaataagctagatggtggtgattcaggggatcaggtgatt
tttactggttctgaagccaatggtgaaggcttgaattctgaatcattggacagatctgtg
acagatgatcttggcaatccgctgaataaactgagcggaatgggatttgacaactcagag
gaaaagaacaaaaagtctacaggtagtgggttaaaaggctgctgtgtggttccacaggct
tctttgaaacgtgttactggcaaagctttgccggttttcagattccttaaaaccaacttg
cttgatatggatgtggcactacctgaagaagctttaagaccatcgaaatcacatccagac
cgtagacgagcttggcgtgcttttgttaaatcggcacaaagcattttcgagttggttcag
gcagcaattgtggtagaagacatgataaagacagagtacttgaaaaatgaatggtggtac
tggtcttctctatcagcggctgctaaaatctcgacgctctctgcgctatcccttcacatc
ttctccctcgaggcagcgattatgtacgataaaggcataactcagtcagatcctatggat
gagacaaaggagataggcttacaagagcagaagtctcaacgtgtaacagatccacaagaa
agaagcagcagagctaacagaaggtctggtaagaaaaggaaagaacctgagggagcataa
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integrated database retrieval system
