Brassica oleracea (wild cabbage): 106344246
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Entry
106344246 CDS
T04124
Name
(RefSeq) polypyrimidine tract-binding protein homolog 1-like
KO
K14948
polypyrimidine tract-binding protein 2
Organism
boe
Brassica oleracea (wild cabbage)
Brite
KEGG Orthology (KO) [BR:
boe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
boe03041
]
106344246
Spliceosome [BR:
boe03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
106344246
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Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_5
RRM_8
DUF4523
Motif
Other DBs
NCBI-GeneID:
106344246
NCBI-ProteinID:
XP_013639111
UniProt:
A0A0D3AG39
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Position
C1:43566645..43569525
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AA seq
395 aa
AA seq
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MASSQFRYTQTPSKVVHLRNLPWECVEEELIDLCKRFSKIVNTKTNVGANRNQAFVEFGD
VNQAISMVSYYASSSEPAQIRGKTVYIQYSNRHEIVNNQSPGEVPGNVLLVTFEGVQSHH
VCIDVIHLVFSAYGFVHKIATFEKAAGFQALVQFTDVDTALAARTALDGRSIPKYLLPEH
VGSCNLRMSYSAHTDLNIKFQSHRSRDYTNPYLPVNQTAMDGSMQPALGADGKRVETQSN
VLLALIENMQYAVTVDVLHTVFSAYGTVQKIAIFEKNGSTQALIQYSDISTATMAKEALE
GHCIYDGGYCKLRLTYSRHTDLNVKAFSDKSRDYTLPDLSQLVGQKVPGVAAASGPTDGW
PNGQVQTQYMGSSYMYPPADPTGASPSSGHPPYYG
NT seq
1188 nt
NT seq
+upstream
nt +downstream
nt
atggcgagctcacagttcaggtatacgcagacgccgtcgaaggtggtgcacctgaggaat
ctgccgtgggaatgcgtggaagaggagctcatcgacctatgcaaacgattcagcaagatc
gtcaatacgaagaccaatgtcggcgccaatcgcaaccaagcctttgtcgaattcggtgac
gtgaatcaggcaatatcaatggtttcttactatgcttcgtcttcagagccggctcagatt
cgagggaagactgtttatattcagtactctaatcgccatgagattgtcaacaatcagagt
cctggagaggtccctggcaatgtcctcttggtcacctttgaaggagtccaatctcaccat
gtctgcatcgatgtcatccatctggtgttttctgcttatggcttcgtgcacaaaattgcc
acttttgagaaagctgctggtttccaggcacttgttcagtttactgatgtggacactgcc
ttagcggcaaggactgcgctggatggtagaagtatacccaaatatctgcttccagaacat
gtaggctcatgcaatttgcgaatgtcttactcagcccacactgatctaaatatcaaattt
cagtcccaccgcagcagggactacacaaatccataccttccggtgaatcaaaccgctatg
gacggttctatgcagcctgctttgggtgctgatggaaagagggttgaaactcagagcaac
gtcctgcttgctttgattgagaatatgcagtacgctgtcaccgtggatgttcttcacacg
gtgttttccgcttatggaactgtgcagaagattgcaatatttgagaaaaatggttcaacg
caagccttaattcaatactctgacatttcaacggcgacgatggcgaaagaagcactggag
ggacactgcatatatgacggaggctactgtaagcttcgactaacttactctcggcatact
gatctcaatgtaaaggcatttagcgacaaaagcagagactacacactgcctgatctaagc
caactggtgggccaaaaggttccaggagtggctgcagctagtgggccaacagatggttgg
cccaatgggcaggtgcagactcaatacatgggaagttcgtatatgtacccaccagctgat
cccacaggagcttcaccttcttctggtcatcctccttattatggttga
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