Bosea sp. F3-2: FQV39_07675
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Entry
FQV39_07675 CDS
T06223
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
bof
Bosea sp. F3-2
Brite
KEGG Orthology (KO) [BR:
bof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bof03032
]
FQV39_07675 (topA)
03400 DNA repair and recombination proteins [BR:
bof03400
]
FQV39_07675 (topA)
Enzymes [BR:
bof01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
FQV39_07675 (topA)
DNA replication proteins [BR:
bof03032
]
Prokaryotic type
DNA Topoisomerases
FQV39_07675 (topA)
DNA repair and recombination proteins [BR:
bof03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
FQV39_07675 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Zn_ribbon_Top1
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
QEL22458
UniProt:
A0A5C1B0I4
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All DBs
Position
1653910..1656573
Genome browser
AA seq
887 aa
AA seq
DB search
MKLLVVESPAKAKTINKYLGSDYEVVASFGHIRDLPAKDGSVEPENDFAMKWEIEGRGAK
QVAEIARAVKGAEKLILATDPDREGEAISWHVLEALNQKKVLKGIPVERVTFNAVTKDAV
QKALANPRAIDQALVDAYLARRALDYLVGFTLSPVLWRKLPGARSAGRVQSVALRIVCDR
EREIEAFRAREYWSLVATLATESGQTFEARLVGADGKKIARLDIGTAEEAKAFKEALETA
LFTVAEVEAKPVKRHPYPPFQTSTLQQEASRKLGLAPARTMQLAQRLYEGVDIGGETVGL
ITYMRTDGVDMDGSAITAARRVIGKEFGDKYVPNAPRKYTVKAKNAQEAHEAIRPTELGR
LPAMVARHLEPEQAKLYELIWKRTIASQMESAELERTTVDIAAKVGARNLDLRATGQVVL
FDGFLTLYQESRDDEEDEDSRKLPAMKAGDRLEKRAIAADQHFTEPPPRFSEASLVKRME
ELGIGRPSTYAATLATLRDREYVRVEKKRLVPEDKGMLVTAFLESFFGRYVEYDFTAGLE
ENLDRVSNAEIDWKALLRAFWEEFQASIGETKDLRVGDVLEALNGILGDYIFPPKADGSD
PRVCPNCGNGTLSLKLGKFGAFVGCSNYPECRYTRPLSIPAAEGEASAEGGQGTPGVRVL
GTDPATGLEVTMRDGRFGPYIQLGEGEKPKRSSLPKGMTPASVTLEKALALLSLPREVAR
HPESGEPILVGIGRYGPYVQHGKTYANIDKGDDVLELGANRAIDLIVAKENGGGRRGGAA
AAPGRALGEHPAGGPLEVKAGKYGPYVAWGKIFATLPKTMTAESITLEQAIELANAKAEA
KGGAKGKAKAAGASKAKAPAKKAAAKKATSEKAEKAPAKSRAKAAGG
NT seq
2664 nt
NT seq
+upstream
nt +downstream
nt
atgaagctcctcgtcgtcgagtcgccggccaaggccaagacgatcaacaaatatctcggc
tccgactacgaggtcgtggcgtccttcggccatatccgcgacctgccggccaaggacggc
tcggtcgagcccgagaacgatttcgccatgaaatgggagatcgagggccgcggtgccaag
caggtcgccgagatcgcgcgcgccgtgaagggcgccgagaagctgatcctcgccaccgac
ccggatcgcgagggcgaggcgatctcctggcacgtgctggaggcgctgaaccagaagaag
gtgctgaagggcatcccggtcgagcgcgtcaccttcaacgccgtcaccaaggacgccgta
cagaaggcgctggccaatccgcgcgccatcgaccaggcgctggtcgacgcctatctggcg
cgccgcgcgctcgactatctcgtcggcttcaccctctcgccggtgctttggcgcaagctg
cccggcgcccgttcggccggccgcgtgcagtcggtggcgctgcgcattgtctgcgaccgc
gagcgcgagatcgaggccttcagggcgcgggaatactggtcgctggtcgcgacactcgcg
accgaatccggccagaccttcgaggcgcgcctcgtcggcgccgacggcaagaagatcgct
cggctcgacatcggcaccgccgaggaagccaaggccttcaaggaggcgctggaaaccgcg
ctcttcactgtggctgaggtcgaggccaagccggtcaagcgccatccctacccgccattc
cagacctcgaccctgcagcaggaggcctcgcgcaagctcgggctggctccagcgcggaca
atgcagctcgcccagcgcctttatgagggcgtcgacatcggcggcgagaccgtcggtctc
atcacctatatgcgaaccgacggcgtcgacatggacggctcggccatcaccgccgcccgc
cgcgtcatcggcaaggagttcggcgacaaatacgtcccgaacgcgccgcgcaaatacacg
gtcaaggccaagaacgcacaggaggcccacgaggcgatccgcccgaccgagctcggccgg
ctgccggcgatggtcgcgcgccatctcgagccggagcaggcgaagctctacgaattgatc
tggaagcgcaccatcgcgagccagatggaatcggccgaactcgagcgcaccacggtcgac
atcgccgccaaggtcggcgcgcgcaatctcgacctgcgcgccaccggacaggtcgtgctc
ttcgacggcttcctgacgctctatcaggagagccgcgacgacgaggaggacgaggactcc
aggaagctgccggcgatgaaggccggcgaccggctggagaagcgcgccatcgccgccgac
cagcacttcaccgagccgccgccgcgcttctcggaagcgagcctagtcaagcgcatggaa
gagctcggcatcggccggccctcgacctatgccgcgacgctggcgaccttgcgcgatcgc
gaatatgtccgcgtcgagaagaagcgcctcgtgcccgaggacaagggcatgctggtgacg
gcattcctggagagcttcttcgggcgctatgtcgagtacgacttcacggcaggcctggaa
gagaacctcgaccgggtctcgaatgccgagatcgactggaaggcgctgctgcgcgcgttc
tgggaggaattccaggcctcgatcggcgagaccaaggacttgcgcgtcggcgacgtgctg
gaggcgctgaacggcatcctcggcgactatatcttcccgccgaaggccgatggctccgat
ccgcgcgtctgcccgaactgcggcaacggcacgctctcgctcaagctcggcaagttcggc
gccttcgtcggctgctcgaactatcccgagtgccgctatacccgcccgctctccatcccg
gcggccgagggcgaggcttccgccgaaggtggccagggcacgcccggcgtgcgcgtgctc
ggcaccgacccggcgaccggcctcgaagtgacgatgcgggacggccgcttcggcccctat
attcagctcggcgagggcgagaagccgaagcgctccagcctgcccaagggcatgacgccg
gcaagcgtcacgctggagaaggcgctggccctgctctccctgccgcgtgaagtcgcgcgc
catccggagtcgggcgagccgatcctggtcggcatcggccgctacggaccttacgtccag
cacggcaagacctacgccaatatcgacaagggcgacgacgtgcttgaactcggcgccaac
cgtgccattgacctgatcgtcgccaaggaaaacggcggcgggcggcgcggcggtgcggcg
gcggcgccgggccgtgcgctcggcgagcatcctgcgggcggcccgctggaggtgaaggcc
ggcaaatacggcccctatgtcgcctggggcaagatcttcgcgacgctgcccaagacgatg
accgctgagagcatcacgctggaacaggcgatcgagctggcgaacgccaaggccgaggcg
aagggcggtgccaagggcaaagccaaagccgcgggcgcgtcgaaggccaaggctccggcg
aagaaggccgcagccaagaaagcgacaagcgagaaggcggagaaggcgcctgccaagagc
agggccaaggcggcgggcggctga
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