Bosea sp. F3-2: FQV39_12950
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Entry
FQV39_12950 CDS
T06223
Name
(GenBank) DNA topoisomerase IB
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
bof
Bosea sp. F3-2
Brite
KEGG Orthology (KO) [BR:
bof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bof03032
]
FQV39_12950
03400 DNA repair and recombination proteins [BR:
bof03400
]
FQV39_12950
Enzymes [BR:
bof01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
FQV39_12950
DNA replication proteins [BR:
bof03032
]
Prokaryotic type
DNA Topoisomerases
FQV39_12950
DNA repair and recombination proteins [BR:
bof03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
FQV39_12950
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Top1B_N_bact
Topoisom_I
Motif
Other DBs
NCBI-ProteinID:
QEL23382
UniProt:
A0A5C1B048
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All DBs
Position
2815119..2816141
Genome browser
AA seq
340 aa
AA seq
DB search
MPVSPQAKRRPAKTRLRRVSSDELTIRRVRHGRFFGYRDAQGEKITDEDMLARIRSLAIP
PAYEDVRIAADPQAHLQAIGHDEAGRTQHRYHPEWEKVRERRKLKRLGRLIAVLPKLRAQ
IAADMRAHALSHQKALACAAAIIDRCHLRVGNESYAENNGSHGTSTLLKRHATLTDTRVA
LHFRGKGGKEIACAIDDAALARALARIAKLPGRRLLQYRREDGSSAPIRAAEVNSYLKDA
CGLPVSSKDLRMLAANAAAAELLLAGEEVTSETGRKRQLADIMRTISERLVNTPAVVRKS
YVHAIVIDAYASGRLQRSYAKARARAGCSRIERALGLLAA
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
atgccggtctccccgcaagctaaacgacgccccgccaagacgcgactgcggcgcgtttcg
tctgacgaactcacgatccgccgtgtccgccatggacgtttcttcggctatcgcgatgcg
cagggtgagaagatcacggatgaggacatgctcgcccgcatccgttcgctcgcgatccca
ccagcctatgaggacgtccgcatcgccgccgatccacaggcacatctgcaggccatcggc
catgacgaggccggccgcacccagcaccgctaccatcccgaatgggagaaggtgcgcgag
cggcgcaagctgaagcgcctcggccggctgatcgcggtgctgccgaaactgcgcgcccag
atcgccgccgatatgcgggcgcatgcgctttcccaccagaaagccctcgcctgcgccgcc
gccatcatcgaccgctgccatttgcgcgtcggcaatgaaagctatgccgagaacaacggc
agccacggcacctcgacgctgctcaagcggcacgccacgctcacggatacacgggtcgcg
ctgcattttcgcggcaagggcggcaaggagatagcctgcgcaatcgacgacgccgcactg
gcaagggcgctggcgcgcatcgccaaactgccgggccggcgactgctgcaatatcgccgc
gaagacggctcctccgcgccgatccgggccgccgaggtcaacagctatctcaaggatgcc
tgtggcctgcccgtcagcagcaaggacctgcggatgcttgccgccaacgctgcagcggcg
gaactgcttcttgcgggcgaggaggttacgagcgagaccggacgcaagcgccagcttgcc
gacatcatgcggacgatctcggagcggctggtcaacacgccagccgttgtgcgcaagagc
tatgtccacgccatcgtcatcgatgcctatgccagcggacggctgcagcgcagctatgcc
aaggcgcgcgcccgggccggctgctcgcggatcgaacgcgcgctcgggctgctggcagct
tga
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