Bosea sp. F3-2: FQV39_18780
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Entry
FQV39_18780 CDS
T06223
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
bof
Bosea sp. F3-2
Pathway
bof03030
DNA replication
bof03410
Base excision repair
bof03420
Nucleotide excision repair
bof03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bof00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
FQV39_18780 (polA)
03410 Base excision repair
FQV39_18780 (polA)
03420 Nucleotide excision repair
FQV39_18780 (polA)
03440 Homologous recombination
FQV39_18780 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bof03032
]
FQV39_18780 (polA)
03400 DNA repair and recombination proteins [BR:
bof03400
]
FQV39_18780 (polA)
Enzymes [BR:
bof01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
FQV39_18780 (polA)
DNA replication proteins [BR:
bof03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
FQV39_18780 (polA)
DNA repair and recombination proteins [BR:
bof03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
FQV39_18780 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
FQV39_18780 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
Taq-exonuc
PUA_4
Motif
Other DBs
NCBI-ProteinID:
QEL24398
UniProt:
A0A5C1B3G7
LinkDB
All DBs
Position
complement(4091412..4094453)
Genome browser
AA seq
1013 aa
AA seq
DB search
MSDTAATAPALKPGDHLFLVDGSNFIFRAYFQSINQDRKYLSRSDGLPSGAVRLFATKLF
QFVREGVLGVKPTHLAIVFDKSENSFRKAIYPAYKGNRSDPPADLIPQFPLMREAVRAFG
LIPVEQDVYEADDLIATYAKQAREAGAEVLIVSADKDLMQLVRPGVAMYDPASGDQKKGA
GFRAERRIGEPEVVEYFGVTPDKVTDVQALAGDATDNVPGAPGIGIKTAAQLIGEYGDLE
TLLARAGEIKQPKRRETLTNPEVVEKVRISHKLVSLVDDVEVETPLETLTLEQPDPAKLI
AFLKAMEFTTITKRVAEAYEADVGAVDADPALAPGGSRAAELKALYAGADVIEDAVSATT
PAAPSPTATLPEATGGEAGWMKPADLAATRKNEAIVAKIDRSKYECLRTLADLERWIGWA
YEAGHVALDIETNSLDAMQADLVGISLAVAPGRACYIPLQHRAGDGGLFDEGLLPEQIPL
AQAVAALKPLLADKGVLKIGQNLKYDLLVLERHGVAVSPIEDTMLISYALDAGSNSHGMD
KLSELHLGHETIPYSQVAGTGKSQVTFDKVPLDRATDYAAEDADVTFRLWLALKPRLAAE
KKTAVYEVLERPMVAVLAAMEARGIAIDRQILSRLSGDFAQGLARLEDEIYELAGEKFTI
GSPKQLGDILFGKMGLEGAKKTATGQWATGAGVLEDLAEQGHALPSKILDWRQLAKLKST
YTDSLPGYVNPQTNRVHTSYALAATTTGRLSSSEPNLQNIPIRTEAGRKIRTAFVPEKGF
KLVSADYSQIELRLLAHIAEIPQLRQAFADGIDIHAMTASEMFGVPVQGMPSEVRRRAKA
INFGIIYGISAFGLANQLGIGREEASAYIRKYFERFPGIRDYMDQTKTHVRAHGQVTTIF
GRVCHFPAVASKNPSERAFVERQAINAPIQGSAADIIRRAMIRMDAALTANRLNARMLLQ
VHDELVFEVPEEEVAKTLPIIEKVMVDAPHPAVQLRVPLAVEARAADNWDEAH
NT seq
3042 nt
NT seq
+upstream
nt +downstream
nt
atgagcgatacagctgcgaccgcccccgccctgaagcccggcgaccacctcttcttggtc
gacggctcgaacttcatcttccgagcctatttccagtcgatcaatcaggaccggaaatac
ctgtcgcgctcggatggtttgccttccggcgcggtccggctcttcgcgacgaagctgttc
cagttcgtgcgcgagggcgtgctcggcgtgaagccgacccatctcgccattgtcttcgac
aagtcggagaactcgttccgcaaggcgatctacccggcctataagggcaatcgctccgac
ccgccggccgatctcattccccagttcccgctgatgcgcgaggccgtgcgcgccttcggc
ctcatcccggtcgagcaggatgtctacgaggccgacgacctgatcgcgacctatgccaag
caggcgcgcgaggcaggcgccgaggtgctgatcgtttcggcggataaagacctgatgcag
ctcgtgcggccgggcgtcgcgatgtacgacccagcctctggcgaccagaagaagggcgcc
ggcttccgcgccgagcgccgcatcggcgagccggaggtggtcgagtatttcggtgtcacc
ccggacaaggtcacggatgtgcaggcgcttgccggcgatgccaccgacaacgtgccgggc
gcacccggcatcggtatcaagacggcggcccagctcatcggcgaatatggcgatcttgaa
accctgctggcccgcgccggcgagatcaagcagccgaagcgccgggagacgctgaccaac
cccgaggtggtcgagaaggtccgcatctcgcacaagctcgtcagcctcgtcgacgacgtt
gaggtcgagacgccgcttgagaccttgacgctggagcagccggacccggcgaagctcatc
gccttcctcaaggcgatggagttcaccaccatcaccaagcgcgtcgccgaggcctatgag
gccgatgtcggcgccgtcgatgctgatccggcgctggctcccggcggttcccgcgcggcc
gagctcaaggcactctatgccggcgccgatgtcatcgaagatgcagtctcagccacgacg
ccggccgcgccttctccgaccgccaccctgcccgaggcgacaggcggcgaggccggctgg
atgaagccggccgatctcgccgccacccgcaagaacgaggcgatcgtggccaagatcgat
cgctccaaatacgaatgcctgcgcacgctcgccgatctcgaacgctggatcggctgggct
tatgaggccggccatgtcgcgctcgacatcgagacgaactcgctcgatgcgatgcaggcc
gatctcgtcggcatctcgctcgccgtcgcgcccggccgcgcctgctatatcccgttgcag
catcgcgccggcgatggcggccttttcgacgaagggctgctcccggagcagatcccattg
gcgcaggccgtcgcggcgctgaagcccctgctggccgacaagggcgtgctcaagatcggc
cagaacctgaaatacgacctgctggtgctggagcgccatggcgtcgccgtgtccccgatc
gaggacacgatgctgatctcctatgcgctcgatgccggcagcaacagccacggcatggac
aagctctcggaactccatctcggccatgagacgattccgtattctcaggtcgccggcacc
ggcaaatcgcaggtcaccttcgacaaggtcccgctcgacagggcgaccgattacgccgcc
gaggatgccgacgtcacgtttcgtctctggcttgcgctgaagccgcggctcgcagctgaa
aagaagaccgccgtctacgaggtactggaacggccgatggtcgccgtgctcgccgccatg
gaggcgcgcggcatcgccatcgaccggcagatcctgtcccgcctctccggcgatttcgcg
caggggctggcgcggctggaggacgagatctacgagctcgccggcgaaaagttcaccatc
ggcagcccgaagcagcttggcgacatcctgttcggcaagatggggctggagggcgccaag
aagaccgcgaccgggcaatgggcgacgggtgccggcgtgctcgaggacctggccgagcag
ggccacgcgctgccctccaagatcttggactggcgccagctcgccaagctcaaatcgacc
tatacggactcgctgccgggctatgtgaacccgcagaccaaccgggtccacacctcctat
gcgctggccgcgaccacgacgggccggctctcctcctccgagcccaatctgcagaacatc
ccgatccgcaccgaggccgggcgcaagatcaggacggccttcgtgccggagaaaggcttc
aagctggtctcggccgactacagccagatcgaactgcgcctgctcgcccatatcgccgag
atcccgcaactgcggcaggcttttgccgatggcatcgacatccacgcgatgacggcctcc
gagatgttcggcgtgccggttcagggcatgccgagcgaggtccgccgccgcgccaaggcg
atcaatttcggcatcatctacggcatctcggccttcggcctcgccaaccagctcggcatc
ggccgcgaggaggcgagcgcctatatccgcaagtatttcgagcgcttccctggcatccgt
gactacatggatcagaccaagacgcatgtccgcgcccatggtcaggtcacgacgatcttc
ggccgcgtctgccacttcccggcggtcgcctcgaagaacccgtccgagcgcgccttcgtc
gagcggcaggcgatcaacgcgccgatccagggctcggccgccgacatcatccgccgggcg
atgatccgcatggatgcggcgctcaccgccaaccggctcaatgcgcgcatgctgctgcag
gtgcatgacgagctcgtcttcgaggtgccggaggaggaggtcgccaagacgctgcccatc
atcgagaaggtgatggtcgatgccccgcatccggcggtgcagctccgcgtgccgctggcg
gtcgaggcccgcgccgccgacaactgggacgaggcgcactga
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