Bosea sp. F3-2: FQV39_21240
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Entry
FQV39_21240 CDS
T06223
Name
(GenBank) Ku protein
KO
K10979
DNA end-binding protein Ku
Organism
bof
Bosea sp. F3-2
Pathway
bof03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
bof00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
FQV39_21240
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bof03400
]
FQV39_21240
DNA repair and recombination proteins [BR:
bof03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
FQV39_21240
BRITE hierarchy
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GFIT
Motif
Pfam:
Ku
HTH_8
Motif
Other DBs
NCBI-ProteinID:
QEL24827
UniProt:
A0A5C1B2M4
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Position
4603262..4604062
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AA seq
266 aa
AA seq
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MPARTYWKGYLKLSLVTCPVAMTPATSESEKVRFHTLNRDTGNRIISRYVDAESGKPVDP
EDQAKGYEAESGRFVVIEEEELEAVRLDTVRTIDVDAFVPRDSIPWVYLDSPHYLVPDDE
VGVEAFSVIRDAMAAAKMVGISRVVLYRRERAVMLEPRDRGIVLWTLRYGDEVRDEKAYF
SEIDEVKPEPELLDLAQKFIKAKSADWSPELVKDPVQEHLLKLIASKKRRKGARVSASRE
DGRPANVVNLFDALKKSLQADKSLRS
NT seq
801 nt
NT seq
+upstream
nt +downstream
nt
atgcccgctcggacctattggaagggctatctcaagctgtcgctggtgacgtgtccggtc
gcgatgacgccagcgacctccgaaagcgagaaggtccgcttccatacgctgaacagggac
accggcaaccggatcatcagccgctacgtcgatgctgagagcggcaagcccgtcgacccc
gaagatcaggccaaaggctacgaggccgaatccggccgcttcgttgtgatcgaagaggag
gagttggaggcagtccggctcgacacggttcgcaccatcgacgtcgacgccttcgtgcca
agggattcgatcccgtgggtctacctcgacagcccgcactatctggttccagacgatgag
gtcggggtcgaggcgttttccgtgatccgcgatgccatggccgccgccaagatggtcggc
atttctcgcgtggtgctctaccggcgcgagcgggcggtgatgctggagccgcgcgaccgc
ggcatcgtgctttggacactgcgctacggcgacgaggtccgcgacgagaaagcctacttc
tccgagatcgacgaggtgaagccggaacccgagctgctcgacctggcgcagaagttcatc
aaggcgaaaagcgccgattggtcgccggagttggtcaaggatccggtccaggaacacctg
ctgaagctcatcgcctcgaagaagcgtcgcaagggcgcgcgcgtatctgcaagccgcgag
gacggccggccggccaatgtcgtcaatctcttcgatgcgctgaagaagagcctgcaggcg
gacaagtcgctgcggtcttga
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