Bosea sp. F3-2: FQV39_28975
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Entry
FQV39_28975 CDS
T06223
Name
(GenBank) autotransporter outer membrane beta-barrel domain-containing protein
Organism
bof
Bosea sp. F3-2
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PATR
Autotransporter
Motif
Other DBs
NCBI-ProteinID:
QEL26192
LinkDB
All DBs
Position
6205289..6212395
Genome browser
AA seq
2368 aa
AA seq
DB search
MIAGGKGGGGAAVVGPGITNPFADFSGNGAGGNGGNGITATASSGLTITNSGTIQGGGGG
TDFLNSQPYRPQAGGYGIIGQNLTIINSGSIQGGARGGAGGLSGNLSSAIVITGGTNSVT
ALTGSNIGVIELVGGSTEISGTYNNVLNANAGVMLALGAAGNATGFTSLNNAGGTINIGD
GNMLSAGTIWNAGGGIINLGTGATLFGTGNTLNNDATINVGTDGVVMDNGDINNNAGGII
NFNGPGGTAILSPGAGYNVNNSGQIKVLGGDVDVQTSNINNQGNGSVSLTGGDMFGVSTF
TNSGAATLNIGAGRKLSLQILAFNGGSISGTGTIEAANAFNLWGDGTVGATLSGAAQLTR
GGPGTTILTGSHSYTGGTTINAGILQLGTAGTAGSIQGQINVNGAGTFTVTNTTTTGIIG
ITNTGTTNFQNGTSAGSTTITNSGELYFYNTSSAGSAVATNNNVLEFHDTSSAGGSNITN
NSNLLFYNDSLAGTATIANNSGFLNFHNASSAANASITNGATLSFYDTSTAGGASMTNNS
DLTFYDASGAGSSAITNNGTLTFRSTSAAGNARMINNSSLVFLHNSNAGGAEIINGSAGT
VDFSGSTGAASDKKLTAGSIAGGGSYLLGANELTAGSNNLSTEVGGVISGTGGSLVKTGT
GTLTLSGINTYTGGTTINGGTLQLGNGGMSGSILGDVVNNGVLAFNRSDAVTFSGAISGS
GAMQQIGTGTTILTGNSGYTGGTTISGGTLQLGSGGKSGSIVGDVANNGTLAFNRSDAMT
FSGAISGSGAVQQIGTGTTILTGNSGYTGGTTISGGTLQLGSGGTSGSIVGDVANNGTLA
FNRSDTATFSGAISGSGAVRQIGTGTTILTGNSGYTGGTTISGGMLQLGSGGTSGSIVGD
VVNNGTLAFNRSDAMTFSGDVSGSGMVRQTGAGTTILTGTNTYAGDTLVSGGRLQFGDGS
AGGSSNNLGGNLIVAGGTLAIQTSATLGVAQVATFGDNTTLSIGATAGGPSLTADSLMLG
TGVAFNLSGVSDASQLDKVLIDTRNGFDGDFGTVTVGGFSGTVDYLTLSTHISADHLQYL
ASFGLSWTANNNLAHGTFTLTNPSDTFTVGVALTDRAANPVTGWDGRSLTKAGSGTLVLS
ADNSYTGGTVISGGTLQLGNGGMSGSILGDVVNNGVLAFNRSDAVTFSGAISGSGAMQQI
GTGTTILTGNSGHTGGTTISGGTLQLGSGGTSGSIAGDVANNGTLAFNRSDAVTFSGAIS
GSGAVRQIGTGTTILTGNSGYTGGTTISGGTLQLGSGGTSGSILGDVANNGTLAFNRSDT
ATFSGAISGSGAVRQIGTGTTILTGNSGYTGGTTISGGTLQLGSGGTSGSILGDVANNGV
LAFNRSDAVTFSGAISGSGAVRQIGTGTTILTGTNSYFGDTTVSAGRLQFGNGSAGGSNA
LGGNLTVNSGTLAIQTPATVSLEQAATFADGTALSIVAGSNGPALSARSVTIGNGVAFNL
SGISDAGQLDKVLIDTRLGISGDFAPVTVGGFSGTVDYLTMSTRKSGDGLQYLASYGLSW
TAGNNLAHGTFTLTNPSDTFTVGVALADRAANLATGWNGTSLIKAGAGTLTLTSDNTYTG
GTTIAGGVLSVSRDANLGAATGGLSFTGGALSTMASFDTARTVSLTQAGRFDVAANTELG
LTGIVSGSGDLIKQGGGTLRLDNGANAYGNTLVTAGTLIGNARSISGNVSNAGTVVFNQA
TDAAFAGDIGALNGSRGAMIKRGAGVLSLTGMSSLDWKIEAGGLATSAERFGGNAALGSG
ASLRFDQAVNATYAGVISGSGSFAKAGAGLLTLTGNSSAFAGTTTIESGTLAVNGSLGGT
VDVLAGGRLQGSGVASNVNVSGTIAPGNSIGTLNIAGNVIFAAGSIYEVEVNAAGQSDKI
VASGTATIAGSSVKVLANMGNYAPQTQYTILTANGGRSGTFSGVTSNLAFLDPSLSYDAN
NVYLTLTRNVVSFQNVGLTPNQIATGGGVERLGAGNPVYNAVLNLSAPQAQYAFDQLSGE
IHASAKSALVEDSRFIRNAINDRIRAAFDSAGAAKGMVTTYVDGKPVAVAATTDRLAVWG
QGFGSWGHTNGDGNAARLNRSTGGFFIGADAPVFDSWRFGAVAGYSRVSFDVKDRHSSGS
SDNYHVGLYGGTNWGDLAFRTGAAYTWHDVSTSRNVMFPGFGNGLKGDYNAGTAQVFGEL
GYGFTMGATRFEPFANLAHVSVHTDGFTERGGAAALTSQGATTDATFTTLGLRASTTFDL
NGAAVTVKGMAGWRHAFGDATPLSTMRFAGGGDAFSTGGVPIARNAAVVEAGLDYALSPN
ATLGVTYGGQFGSGLSDQSARFNLNVTF
NT seq
7107 nt
NT seq
+upstream
nt +downstream
nt
gtgatagcgggcggcaagggcggcggcggcgcagccgttgtcgggccgggcatcaccaat
cccttcgccgacttctcgggcaacggcgcgggcggcaatggcggcaacggcatcaccgcc
accgcctccagcgggctgacgatcaccaattccgggacgatccagggcggcggcggggga
acggacttcctgaactcccagccctatcgcccgcaggccggcggttacggcatcattggc
cagaacctgaccatcatcaacagcgggagcattcagggcggcgcgcgcggcggcgccggc
ggcctgtcgggaaacctctcctccgcgatcgtcatcaccggcggcacgaacagcgtcacg
gcgctgaccggcagcaatatcggcgtgatcgaactggtcggcggcagcacggagatttcc
ggcacttacaacaatgttctcaatgcaaatgcaggtgtcatgctcgccttgggtgctgcc
ggaaatgccaccggctttacgagcctcaacaatgcgggcggcacgatcaacatcggtgac
ggcaacatgctgtccgccggaaccatctggaatgccggtggagggataatcaacctgggg
accggtgccacacttttcggcaccggcaacacgctgaataacgatgccaccatcaatgtc
ggtaccgacggcgtcgtgatggacaatggcgacatcaacaacaacgctggcggcatcatc
aacttcaatggccccggcggcacggcgatactttcccctggggctggttacaacgtcaac
aacagcggccagatcaaggttctcggcggcgatgttgatgtccagacgagcaacatcaac
aaccagggcaacggttcggtgtcgctcactggcggcgacatgtttggcgtctccacattc
acaaattcaggcgcggcgaccctcaatatcggcgcaggccgcaagctcagcctgcaaatc
ctcgcattcaatggcggcagcataagcggcactggcacaatcgaagccgcgaacgcgttc
aacctctggggcgacggcacggttggcgcaacactctccggcgcagcgcagctgaccaga
ggcggtcccgggacgacgattctaaccggcagccacagctacaccggcggcaccacgatc
aacgccggcattttgcaacttggcaccgctggcaccgccggctcgatccagggccagatc
aatgtgaacggcgctggtacattcaccgtcaccaataccaccaccacgggcatcatcggt
atcacgaataccggcacaaccaacttccagaatggaaccagtgccggcagcaccaccata
accaacagcggcgaactctatttctacaataccagcagcgccggcagtgctgtcgcgacc
aacaacaatgtcctcgaatttcacgatacgagctcggccggcggcagcaacatcaccaac
aacagcaatctgttattctacaacgacagccttgccggcaccgccacgattgccaacaac
agcggttttctgaacttccacaatgcaagctccgcagccaatgctagcatcacaaatggc
gccacgctgtccttctacgacacgagtacggccggcggcgccagcatgaccaacaatagc
gatctcacattctacgacgcgagcggcgccggcagctcggcgatcaccaacaacggcacc
ctgactttccgctccaccagcgcggccggcaacgccaggatgatcaacaactccagcctg
gtgtttctccacaacagcaacgccggtggcgccgagatcatcaatggctcggctggcact
gtcgatttctcgggctcgacgggtgccgccagtgacaaaaaactcaccgccggctcgatc
gcaggcggcggctcctatctgcttggcgccaacgaactgaccgccggctcgaacaatctc
tcgaccgaggtgggcggcgtgatctccggcacaggcggctcgctggtcaaaactggcacc
ggcacactgacgctgtcggggatcaatacttataccggcggcaccacgatcaatggcggc
accttgcagctcggcaatggcggcatgagtggctcgattctgggcgatgtcgtcaacaac
ggtgtgctcgccttcaaccgctccgatgcggtgactttctccggtgccatttccggcagc
ggcgcgatgcagcagatcggcacgggcacgacgatcctgaccggaaacagcggctatacg
ggcggcacgacgatcagcggcggtacgctgcaactcggcagtggtggcaagagcggctcg
atcgtcggcgatgtcgccaacaacggcacgctcgccttcaaccgcagcgatgcgatgacc
ttctccggcgccatctccggcagcggtgcggtgcagcagatcggcacgggcacgacgatc
ctgaccggaaacagcggctacacgggcggcacgacgatcagcggcggtacgctgcaactc
ggcagtggcggcacgagcggctcgatcgtcggcgatgtcgccaacaacggtacgctcgcc
ttcaaccgctccgatacggcgaccttctccggcgccatctccggcagcggcgccgtgcgg
cagatcggtacgggcacgacgatcctgaccggaaacagcggctacacgggcggcacgacg
atcagcggcggcatgctgcaactcggtagtggcggcacgagcggctcgatcgtcggtgat
gtcgtcaacaacggcacgctcgcctttaaccgcagcgatgcgatgaccttctccggcgat
gtttccggcagcggcatggtgcgccagaccggtgcgggcaccacgatcctgacaggcacg
aacacctatgccggcgacaccctcgtttccggcggccggttgcagttcggcgacggcagt
gcgggcggcagcagcaacaatctcggcggcaatctgatcgtggccggcggcacgctggcg
atccagacgtcggcgaccctgggcgtcgctcaggttgcgacttttggcgacaacaccacg
ctgtcgatcggcgccactgccggcggtccctcgcttaccgccgatagcctcatgcttgga
acgggcgtcgccttcaatctcagcggcgtcagcgatgcaagtcagctcgacaaggtgctg
atcgacacgcgcaacggcttcgacggcgatttcggcacggtgacagtgggcgggttcagc
gggacggtagattatctcaccctctcgacccacatttcggcagatcatctgcaatatctc
gccagtttcggcctgagctggacggccaacaacaatctggcgcatggcacgttcacgctg
accaatccctccgacaccttcacggtgggggtggcgctcaccgatcgggcggccaatcct
gtgaccggctgggatggcagatcgctgaccaaggccggttcgggcacgttggtcctctcg
gcggataattcctataccggcggcacggtcatctcgggaggcacgctgcaactcggcaat
ggcggcatgagtggctcgattctgggcgatgtcgtcaacaacggtgtgctcgccttcaac
cgctccgatgcggtgactttctccggcgccatttccggcagcggcgcgatgcagcagatc
ggcacgggcacgacgatcctgaccggaaacagcggccacacgggcggcacgacgatcagt
ggcggtacgctgcaactcggcagtggcggcacgagcggctcgatcgccggcgatgtcgcc
aacaacggcacgctcgccttcaaccgcagcgacgcggtgaccttctccggcgccatctcc
ggcagcggcgccgtgcggcagatcggtacgggcacgacgatcctgaccggaaacagcggc
tataccggcggcacgacgatcagcggcggcacactgcaactcggcagcggtggcacgagc
ggctcgatcctcggcgatgtcgccaacaacggcacgctcgccttcaaccgctccgatacg
gcgaccttctccggcgccatctccggcagcggcgccgtgcggcagatcggtacgggcacg
acgatcctgaccggaaacagtggctatacgggcggcacgacgatcagcggcggcacactg
caactcggcagcggtggcacgagcggctcgatcctcggcgatgtcgccaacaacggtgtg
ctcgccttcaaccgctccgacgcggtgaccttctccggcgccatctccggcagcggcgcc
gtgcggcagatcggtacgggcacgacgatcctgaccggaaccaacagctacttcggcgac
accaccgtttcagccggccggctgcagttcggcaacggcagtgcgggcggcagcaatgcc
ctcggcggcaacctgaccgtgaacagcggcacgctggcgatccagacgccggcgaccgtg
agcctcgagcaggccgcgacctttgccgatggcaccgcgctttccatcgtcgccggctcg
aacggcccggcgctgtcggcccgcagcgtcacgatcggcaacggcgtcgccttcaatctc
agcggcatcagcgatgcgggccaactcgacaaagtgctgatcgatacccgcttggggatc
agcggcgacttcgcccctgtcaccgtcggcggcttcagcggcacggtggactatctcacc
atgtccacccgcaaatcgggcgacggcctgcaatacctcgcaagctacggcctgagctgg
accgccggcaacaatctcgcccatggcaccttcacgctgaccaatccctccgacaccttc
acggtgggggtggcgctcgccgaccgggcggcgaaccttgcgacgggctggaacgggacc
tcgctgatcaaggccggcgccggcacgctcaccctgaccagcgacaacacctataccggc
ggcacgacgatcgcgggcggtgtgctgtcggtgtcgcgcgacgccaatctcggcgcagcg
acgggcggcctgtccttcaccggtggcgcgctttcgaccatggcgagcttcgataccgcg
cgcaccgtgtcgctgacgcaggcaggccgcttcgacgtggcagccaacaccgagcttggc
ctgaccgggatcgtctccggcagtggcgatctgatcaagcagggcggcggcacgctgcgg
ctcgacaacggcgccaacgcctatggcaacaccctcgtcacggctggcacgctgataggc
aatgcccgttcgatctcgggcaatgtcagcaatgccggcacggtcgtcttcaatcaggcg
accgacgccgcctttgccggcgacatcggggcgctcaatggctcgcggggcgcgatgatc
aagcgcggtgcgggtgttctgagcctgaccgggatgtcgtcgctcgactggaagatcgaa
gccggcgggctcgccacctcggccgagcgcttcggcggcaatgccgctctcggctctggc
gcctccctcaggttcgaccaggcggtcaacgcgacctatgccggcgtgatttcgggcagc
ggcagcttcgcaaaggccggcgcgggcctgctgaccctgaccggcaactcctccgccttt
gccggaacgaccacgatcgagagcggcacgcttgcagtcaacggctcactcggcggcacc
gtcgacgtgctggccggcggccgcctgcaaggcagcggcgtggcgagcaatgtgaacgtt
tcgggcacgattgcgccaggcaactcgatcggcacactgaacatcgccggaaacgtcatc
tttgcggcgggctcgatctacgaggtcgaggtgaacgcagcggggcagtcggacaagatc
gtcgccagcggcacggcgaccatcgccggcagctcggtcaaagtgctggccaacatgggc
aactatgcgccgcagacccagtacacgatcctcactgccaatggcggccggagcggcacc
ttcagcggcgtgacctcgaacctcgccttcctcgatccctcgctcagttacgacgccaac
aacgtctatctgacgctgacgcggaatgtcgtcagcttccagaacgtcggcctgaccccg
aaccagatcgccaccggcggcggcgtcgagagacttggggcaggcaacccggtctacaat
gcggtgctgaacctgtcggctccgcaggcgcagtacgccttcgaccagctctcgggcgag
atccacgcttcggcgaagtcggcgctggtcgaggatagccgcttcatccgcaacgctatc
aacgaccgcatccgtgcggccttcgacagtgccggcgccgcgaagggcatggtcacgacc
tatgtcgacggcaagccggttgcggtcgccgcgacgacggatcgtctggcggtctggggc
cagggcttcggctcctgggggcacaccaatggcgacggcaatgccgcgcgcctcaaccgc
tcgaccggtggattcttcatcggcgcggatgcgccggtgttcgacagctggcgcttcggc
gcggtcgcgggctacagccgcgtcagcttcgacgtgaaggaccgtcactcctccggctcg
agcgacaattaccatgtcggcctttatggcggcacgaactggggtgatctcgccttccgg
accggcgccgcctacacttggcatgacgtctcgacctcacggaacgtgatgttccccggc
ttcggcaatggcctgaagggcgactacaacgccggcacggcgcaggtcttcggcgagctc
ggctacggcttcaccatgggcgcgacccggttcgagcccttcgccaacctcgctcatgtg
agtgtccataccgatggcttcaccgagaggggcggggcggctgcgctgaccagccagggg
gccacgacggatgcgaccttcacgacattgggccttcgcgcctcgaccaccttcgacctc
aacggcgcggctgtgacggtcaagggcatggcaggctggcgtcacgccttcggcgatgcg
acgccgctctcgacgatgcgctttgccggtggcggcgacgccttctcgaccggcggggtt
ccgatcgcgcgcaatgcggcggtggttgaagccggcctcgactacgcactctcgccaaac
gcgacgctcggcgtcacctatggcggccagttcggctcaggtctctccgaccagtccgct
cgcttcaacctcaatgtcacgttctga
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integrated database retrieval system
