KEGG   Bombilactobacillus thymidiniphilus: MOO47_00780
Entry
MOO47_00780       CDS       T08331                                 
Name
(GenBank) ribonuclease J
  KO
K12574  ribonuclease J [EC:3.1.-.-]
Organism
bog  Bombilactobacillus thymidiniphilus
Pathway
bog03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:bog00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    MOO47_00780
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:bog03019]
    MOO47_00780
Messenger RNA biogenesis [BR:bog03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     MOO47_00780
SSDB
Motif
Pfam: RNase_J_b_CASP RNase_J_C Lactamase_B RMMBL Anti-Pycsar_Apyc1 Lactamase_B_2 SIS_2 DUF4453 ODP
Other DBs
NCBI-ProteinID: UQS83771
UniProt: A0ABY4PDH5
LinkDB
Position
143633..145321
AA seq 562 aa
MTLKINKDEVAVFAIGGLGEIGKNMYVIQYQNEIVIIDAGIKFPEDELLGIDYVISDYQY
LAQNRDKIKGLFITHGHEDHIGGIPYFLQKVPDVPIYAGPLATALIKGKLEEHGLLESTQ
MHVLQEEDIVNFEHLGVEFFRTTHSIPDTLGIAVHTPQGIIIQTGDYKFDLTPVGNQPAP
NLQKMAKLGSEGVLLLLSDSTNAEIPTFSKSERFVGNTIHQIVERIEGRIIFATFASNLY
RVSQAVDAAMQNGRKVAVFGRSMEQAIVNGRELGYLDIPDSEILDAADINKLPANKVMLL
CTGSQGEPMAALSRIANGTHRQITVQPGDTVIFSSNPIPGNTTSVNHLINELEEAGADVI
HGKVNNIHASGHGGQEEQKLMLRLIEPKFFMPIHGEYRMLKIHTELAQLCGVPEDHTFIF
ENGDVLALTKNSARKADHVPAGDVYVDGNGIGDISNVVIHDRQILSEEGLVIVVATIDYH
KGLVLSGPDILSRGFVYMRESGDLINQAQKRVFHTIKTHLDASDKVNEAVLKRDIIDNLQ
EFLFRRTERHPVILPMIISTQV
NT seq 1689 nt   +upstreamnt  +downstreamnt
atgactttaaaaataaataaagatgaagtggcagtttttgctatcggcggtctcggtgaa
attggcaaaaatatgtacgtcatccaatatcaaaatgaaatcgtcattattgatgcagga
ataaagtttcctgaggatgagttattaggtattgactatgtaatttctgattatcagtac
ttagcacaaaatcgtgacaaaattaagggcttatttatcacccacggtcatgaagatcat
attggcggtattccctactttttacaaaaagtgcctgatgtacctatctatgctggtcct
ttggcaactgctttaatcaagggcaagctggaagaacacggattattggaatccactcaa
atgcatgttttgcaagaagaagatattgttaattttgagcatttaggtgtggaatttttc
cgcacaacacattctatccccgacactttaggtattgctgtccatacgccacaaggcatt
attattcagactggtgattacaagtttgatttaacacctgttggtaaccagccagcgcct
aacctgcaaaaaatggctaagctaggttctgaaggagttttgctattactgtcagacagt
actaatgcagaaattccaactttttctaagtcggagcgttttgtcggaaatacgattcac
caaattgtagagcggattgaaggacggattatttttgccactttcgcatctaacctttat
cgcgtttcccaagctgttgacgccgccatgcaaaatggacgtaaagtagctgtttttggt
cgtagtatggagcaagccattgttaatgggcgagaattagggtatttagatattcctgat
agtgagattctagatgctgccgacattaacaaactacctgctaataaagtaatgttactt
tgtactggatctcaaggagagccaatggctgccttgagtcgcattgcgaatggtacacat
cgccagatcacagttcaaccgggtgatactgtaatcttttcttctaatccaattcccggt
aataccactagtgtcaatcacctgattaatgaattagaagaagctggcgctgatgttatt
catggtaaagttaataatatccacgcttcaggtcatggtggtcaagaagaacaaaaacta
atgttgcgcttaattgagcctaaatttttcatgccaattcacggtgaatatcgtatgttg
aaaattcacactgaactagcacaattatgtggtgtcccagaagatcatacttttattttt
gaaaatggcgatgttttggcacttactaagaattcagctcgtaaagctgatcacgtgcca
gctggcgatgtttacgttgacggcaatggaattggtgatattagcaatgttgtgattcat
gaccgacaaatattgtctgaagaaggattggtaattgtcgttgctacaattgattatcac
aagggattagtattatctggaccagatattttatcacgtggctttgtttacatgcgcgaa
tctggtgatttaatcaatcaagctcaaaagagggttttccatacaattaaaactcatcta
gatgcatcagataaagttaatgaagctgtcttaaagcgtgatattattgataatttacaa
gagtttctctttcgaagaacagaaagacacccagtcattttaccaatgatcatttctaca
caagtataa

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