Bombilactobacillus thymidiniphilus: MOO47_01025
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Entry
MOO47_01025 CDS
T08331
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
bog
Bombilactobacillus thymidiniphilus
Pathway
bog03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
bog00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
MOO47_01025
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bog03400
]
MOO47_01025
Enzymes [BR:
bog01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
MOO47_01025
DNA repair and recombination proteins [BR:
bog03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
MOO47_01025
Prokaryotic type
MOO47_01025
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
UQS83817
LinkDB
All DBs
Position
complement(188442..189128)
Genome browser
AA seq
228 aa
AA seq
DB search
MKQLIKNDWQTVIGPEFDKEYYRQLHQFLKHEYQTQTIYPDMYHIFQAFEWTSYHDTKVV
ILGQDPYHGPNQAHGLSFSVLPGNKVPPSLQNIYKELQADLGIAPVKHGYLKYWAQQGVL
LLNSVLTVRQGKAFSHQGKGWETLTNQVIQKLSQKGGVVFILWGKAAKAKSNLIDISKNT
IISSTHPSPFSANYGFFGSRPFSQTNKALQKYHEQPIDWQLPQQPQDN
NT seq
687 nt
NT seq
+upstream
nt +downstream
nt
ttgaagcaattaataaaaaatgattggcaaacagttattggtccagagtttgataaagaa
tattatcgccagttgcatcaatttttgaaacatgagtaccaaacacagacaatttatcct
gatatgtatcacatttttcaagcttttgagtggacatcttatcatgatacaaaagtggtt
attttgggacaagatccttatcatggacccaatcaagcccatggtttaagtttttcagtt
ttaccaggcaataaggtgccaccttctttacaaaatatttataaagaattacaagctgat
ttaggcattgctccagttaaacacggttatttgaaatactgggcacaacaaggtgtatta
ttacttaattcggttttgacagtacgacaaggtaaagcattttcgcaccaaggaaaaggt
tgggagactttaacgaaccaagttatccaaaagttgtcccaaaagggtggtgtagtcttt
attttgtgggggaaagcggctaaagccaaaagtaatttaattgatattagtaaaaataca
attattagttctacgcatccgagtcctttttcagctaattatggcttctttggttcaaga
ccattttcgcaaactaataaagctttgcagaaatatcatgaacagccaattgattggcaa
ttaccacagcaaccgcaagataattaa
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