Bombilactobacillus thymidiniphilus: MOO47_01535
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Entry
MOO47_01535 CDS
T08331
Name
(GenBank) DEAD/DEAH box helicase
KO
K18692
ATP-dependent RNA helicase CshB [EC:
5.6.2.7
]
Organism
bog
Bombilactobacillus thymidiniphilus
Brite
KEGG Orthology (KO) [BR:
bog00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bog03019
]
MOO47_01535
03009 Ribosome biogenesis [BR:
bog03009
]
MOO47_01535
Enzymes [BR:
bog01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
MOO47_01535
Messenger RNA biogenesis [BR:
bog03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
MOO47_01535
Ribosome biogenesis [BR:
bog03009
]
Prokaryotic type
rRNA helicases
MOO47_01535
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Helicase_RecD
AAA_30
CMS1
DUF2608
AAA_22
Flavi_DEAD
Motif
Other DBs
NCBI-ProteinID:
UQS83900
LinkDB
All DBs
Position
complement(285307..286656)
Genome browser
AA seq
449 aa
AA seq
DB search
MANFADYRFTDFLNKALTKINFQKPTPVQEKVIPLVQTGRDLIVQAQTGSGKTHAYLLPL
LDELTDAQQVQLVITAPSRELAYQIRNDTEQLLANQPSTLRVGLYVGGTDKQKQVNSLKN
KQPQIVIGTPGRVWDLVRSHDLLVYQTKYFVIDEADMTLDLGFLKDVDLIAGSMPEKLQT
MVFSATIPPKLQPFLKKYLHNPKVEKLAVPTVIAPNIDNWSLFTRGRDRKQVLKQVLTIG
QPYLALVFANTKKTVDEVYDYLVQQGLNVAKIHGDLKPRERRRIMKAIENMEFQYVVASD
LAARGIDIPGVSHVVNYQLPSDDEFFIHRVGRTGRNQLGGTAITLYGPDEEEQIHHLENL
GIVFQPKEIKNGEFVDTYERDRRQKRSATNKQLDNKLVGLVKKQKQKKKPGYRKKIKQAI
SDDRRQQRKLEHRQQQRQQRKIKKQNHLK
NT seq
1350 nt
NT seq
+upstream
nt +downstream
nt
atggcaaattttgccgattatcgttttactgattttttaaataaagcacttactaaaatt
aattttcaaaaaccaactcccgttcaagaaaaagtcattccgctcgtgcagaccggacgt
gatttaattgtgcaggctcaaacgggtagtggaaaaacacatgcttatttattacccttg
ctggatgaactgacggatgcgcaacaagtgcaattagtcattacagcacctagtcgtgag
ttggcataccaaattcgcaatgatactgagcaattattggcaaaccagccaagtactttg
cgcgtaggattgtacgttggtggaactgacaaacaaaagcaagttaatagtcttaaaaat
aaacagcctcagattgtaattggtactcccggacgagtttgggatttagttcgcagtcac
gatctattggtttatcaaactaaatattttgttattgatgaagccgatatgactttagat
ttaggatttttaaaagatgttgatctgattgctggtagcatgccggaaaagctacaaaca
atggtcttttcagctaccatacctcccaaattacaaccatttttgaaaaaatatttgcat
aatccaaaagtagaaaaattagcggtaccaacagttattgcacctaacattgataattgg
tcgctttttacgcgcggacgcgatcgcaaacaagtcttaaaacaagttttaactattgga
cagccttatttggctttggttttcgccaacactaaaaaaacagtggatgaagtttatgat
tatttagtccaacaaggtttaaacgtggcgaaaattcatggtgacctaaaaccacgtgaa
cgccgtcgaattatgaaagctattgaaaatatggaatttcaatatgtcgtggcttcagat
ttagcagcgcggggaattgatattcccggagtttctcatgtggtaaactatcaattgcct
agtgatgatgaatttttcattcatcgagtcggtcgtaccggtcgtaaccaattgggtggc
actgcaattactttgtacggacccgatgaggaagaacaaattcatcatttagaaaattta
ggtattgtttttcaaccaaaagaaattaaaaatggcgaatttgtggatacgtatgaacgc
gatcgccgccaaaaacgatcagctactaataagcaattggacaataagttagttggtcta
gtcaaaaagcaaaaacaaaagaaaaaaccgggttatcgtaaaaagattaagcaggccatt
tctgatgatcggcgtcagcaacgtaagttggaacatagacagcaacagcgccaacaacgg
aaaatcaaaaaacagaatcatttaaagtga
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