Bombilactobacillus thymidiniphilus: MOO47_01955
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Entry
MOO47_01955 CDS
T08331
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
bog
Bombilactobacillus thymidiniphilus
Pathway
bog03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
bog00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
MOO47_01955
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bog03021
]
MOO47_01955
03400 DNA repair and recombination proteins [BR:
bog03400
]
MOO47_01955
Enzymes [BR:
bog01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
MOO47_01955
Transcription machinery [BR:
bog03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
MOO47_01955
DNA repair and recombination proteins [BR:
bog03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
MOO47_01955
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
RNA_pol_L_2
HHH_5
SAM_EPH
Motif
Other DBs
NCBI-ProteinID:
UQS83975
LinkDB
All DBs
Position
complement(363089..364024)
Genome browser
AA seq
311 aa
AA seq
DB search
MIEFEKPVITKIDETDNYGKYVIEPLERGYGTTLGNSLRRVLLASLPGTAVSDIQIDGVL
HEFTTIDGVLEDVTEIVLNVKKLSLKLHSDEKKVEINVDGPKKVTAADIITDDDLEILDP
DQYICTVAEGGQLHMQLTVKVGRGYVSADQNKNDETPISVLPVDSIFTPVSRVNYQVEHT
RVGKRSDFDKLTLDVWTNGSIEPKDAISLAAKVLTEHLEIFVDLTDTAKNAEMMVEKEET
RKEKKLEMTIEELDLSVRSYNCLKRAGINTVQELTDKSEADMMKVRNLGRKSLEEVKVKL
INLGLSLRQDD
NT seq
936 nt
NT seq
+upstream
nt +downstream
nt
atgattgaatttgaaaaacctgttattacaaaaattgatgaaacagataattatggcaaa
tacgtcattgaaccattagaacgcggttatggaactactttaggtaattctttgcgtcga
gttttgttagcatcgctgcctggaactgcagtttctgacattcaaattgacggggttttg
catgaatttacaactattgatggtgtcttagaagatgttactgagattgtcttaaatgtt
aagaaattatctttgaagttacattctgacgagaaaaaagttgaaattaatgttgatgga
ccgaaaaaagttactgccgctgatattattactgatgatgacttagaaattttggatcct
gatcagtatatttgtacggttgctgaaggcggtcaattgcatatgcaattaactgttaag
gttggtcgaggttatgtttcagctgaccaaaataaaaatgatgaaactccaattagtgtt
ctacctgttgactcaatttttacccctgtttctcgtgtcaattatcaggttgaacacact
cgagtaggtaagcgtagcgattttgataaattgacgttagatgtttggacaaatggttcc
attgaacctaaagatgctattagtttagctgctaaagtgttgactgagcatctagaaatt
tttgtggatctgacggatacggctaagaacgcagaaatgatggttgaaaaagaagaaact
cgtaaagagaagaaactggaaatgaccattgaagaacttgatttatcagttcgttcctat
aattgcttgaaacgtgcgggaattaatactgttcaagaattaaccgataaatctgaagct
gacatgatgaaagtacgtaatttagggcgtaagtctttagaagaagtaaaagttaagtta
attaacttaggactttcattgcgtcaagatgattaa
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