Bombilactobacillus thymidiniphilus: MOO47_02155
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Entry
MOO47_02155 CDS
T08331
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
bog
Bombilactobacillus thymidiniphilus
Pathway
bog03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
bog00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
MOO47_02155
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bog03021
]
MOO47_02155
03400 DNA repair and recombination proteins [BR:
bog03400
]
MOO47_02155
Enzymes [BR:
bog01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
MOO47_02155
Transcription machinery [BR:
bog03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
MOO47_02155
DNA repair and recombination proteins [BR:
bog03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
MOO47_02155
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_3
RNA_pol_Rpb2_45
RNA_pol_Rpb2_1
Motif
Other DBs
NCBI-ProteinID:
UQS84015
LinkDB
All DBs
Position
complement(393546..397226)
Genome browser
AA seq
1226 aa
AA seq
DB search
MTKETVSYHNVNYGKHRTRRSYARIKEVLPLPNLIDIQTNSYNWFLDEGLKEMFQDIMPI
DDFAGTLSLDYVDYKLLEPKYTVDEARDHDANYSAPLHVKLRLTNHESGEIKTQDVFFGD
FPLMTEQGTFIINGAERVIVSQLVRSPGVYYTAEADKNGRMIYGATVIPNRGAWLEFDND
AKNISYVRIDRTRKLPITELMRALGFGLDSEILDILGNSSESLNLTLEKDVHKDTSDSRV
EEALKDIYERLRPGEPKTAESSRSLLYARFFDPKRYDTAPVGRYKVNKKLNLKTRLRGLT
LAETLADPDTGEIILNKDTVLDREAMSKLAPYLKNSDFKATTFQPSDEGILADPVKVQII
KVYSQVDEDRVVNMIGNANIPESVKHITPADILAEINYFFNLQEGIGSTDDIDHLGNRRI
RSVGELLQNQFRLGLSRMERVVRERMSIQDTATVTPQQLINIRPVVAAIKEFFGSSQLSQ
FMDQNNPLGELTHKRRLSALGPGGLTRDRAGYAVRDVHYTHYGRMCPIETPEGPNIGLIN
NLATYGVVNKYGFVETPYRRVSWDTHKVTDKIDYLTADEEDNYVVAQANTPLNDDGSFAE
ERILARHQDDNIETTVDKVDYMDVSPRQVVSVATSCIPFLENDDSNRALMGANMQRQAVP
LIKPHSPLVGTSMEYVAAHDSGTAMLAKYAGIVEYVDAKIIKIKRDDSDVVDTYHLMKYR
RSNAGKCYNQRPIVEKGNHVDRSEIIADGPAMQEGELALGQNPLIAFMTWNMYNYEDAIV
LSERLVKDDIYTSIHIEEFESEARDTKLGPEEITREIPNVGEDALKDLDEDGIIRVGAEV
RDGDILVGKVTPKGVTELSAEERLLHAIFGEKAREVRDTSLRVPHGGGGIVQDVKVFSRE
EGDELSPGVNSMVRIYIAQKRKIQVGDKMAGRHGNKGTVSIVVPEEDMPYMPDGTPVDIL
LNPMGVPSRMNIGQVLELHLGMAARNLGIHVATPVFDGVNDDDLWKAVQEANMASDAKTV
LYDGRTGEPFHNRVAVGVMYYMKLAHMVDDKIHARSIGPYSLVTQQPLGGKAQFGGQRFG
EMEVWALEAYGAAYTLQEILTYKSDDVTGRVNTYEAIVKGETIPKPGVPESFRVLVKELE
SLGLDMKILDHENKEVELREMDEDPTIKSIDALSKLALEQEQKLVQEEADKKQDDQEIEA
QEEPELEKVMDQMINSNTDASNNDEQ
NT seq
3681 nt
NT seq
+upstream
nt +downstream
nt
ttgacgaaagaaacagtaagttatcacaatgtcaattatggcaaacaccgaactcgtcgc
agttatgcacgaattaaagaagtattaccattacccaatttgattgatattcaaactaat
tcttataattggtttttggatgaaggtcttaaggaaatgttccaagacatcatgccaatt
gatgattttgcggggactttatccttagactatgtagattataagcttttagagccaaaa
tatactgttgatgaagcacgtgatcacgatgctaactattcggctcctctgcatgttaag
ttgcggttgaccaatcatgagagcggtgaaatcaagacgcaagatgttttctttggcgat
ttcccactgatgactgaacaaggaacttttattattaatggtgctgaacgagttatcgtt
tctcaattagtgcgttccccgggcgtgtattacacggctgaagctgacaaaaatggtcgc
atgatttatggggcgactgtcattcctaaccgtggcgcttggctagaatttgataatgat
gctaaaaatattagttatgtgcggattgatcgtactcgtaagttaccaattacggagttg
atgcgtgcactaggtttcggtttagatagcgagattctggatattttgggtaatagcagt
gaatctttaaatttaaccttagaaaaagatgtccacaaagatactagtgattcacgtgtt
gaagaagcacttaaagatatttatgaacgtttacgccctggtgaacctaaaacagctgaa
agttcacgttctttgctttatgcacgtttcttcgatccaaaacgttatgatacagctcca
gttggtcgctacaaagttaacaagaaattaaatttaaagacacgtttacgtggtttaact
ttagctgaaactttagctgatccggatactggggagattattttaaataaggatacggtc
ttagatcgcgaagcgatgagtaaattagctccttatttgaagaattctgattttaaagct
acaactttccaaccttctgatgaaggtattttggctgatccagtaaaagttcagattatc
aaagtttactcacaagttgatgaagatcgggttgtgaatatgattggtaacgctaatatc
cctgagagtgttaaacatattactcctgctgatattttagctgaaattaattatttcttt
aacttgcaagagggtatcggtagcaccgatgatattgatcacttgggtaatcgacggatt
cgttcagttggtgaattattgcaaaatcaattccgtttaggcttatctagaatggagcgt
gttgttcgtgaacggatgtctattcaagacactgccacagtgacaccacaacaattgatc
aatattagacccgttgtagcagctatcaaagaattctttggttcctctcaattatcacaa
ttcatggatcaaaacaatcctcttggtgagttgacgcataaaagacgtttgtcagcttta
ggaccgggtggtttgactcgtgatcgtgctggttatgcggttcgtgatgttcactatacg
cattatggtcggatgtgcccaattgaaacgccagaaggtcctaacattggtttgattaac
aacttggctacttatggagttgttaataaatatggttttgtggaaacgccttatcgccgt
gtttcttgggatacgcataaagttactgacaaaattgattatttaacggctgatgaagaa
gataattatgttgtagcgcaagctaacacacctttaaatgatgatggttcatttgcagaa
gaacgtattttagcgcgtcatcaagatgataatatcgaaacaactgtggataaagtcgat
tatatggatgtttcaccacgtcaagttgtttcagtagctacttcctgtattcctttcttg
gaaaatgatgactctaaccgtgctttgatgggtgctaacatgcaacgccaagctgtgcct
ttgattaagccacattctccattggtaggtactagtatggaatatgttgctgctcatgat
tctggaacggcaatgttagctaaatatgcgggaatcgtggaatatgttgatgctaaaatt
atcaaaattaaacgtgatgattcagatgttgtagacacttatcatttaatgaagtatcgt
cgttctaatgcgggtaaatgttataaccagcgtccaatcgtagaaaaaggtaaccacgtt
gatcgtagtgaaatcattgctgacggtccggctatgcaagaaggtgaacttgctttaggg
caaaatcctttaattgcatttatgacttggaatatgtataactatgaagatgcgattgtt
ttgtctgaacgtttagtaaaagatgacatttatacttctattcatattgaagaatttgaa
tcagaagcacgagacaccaaattaggacctgaggagatcactcgcgaaatccctaatgtt
ggtgaagatgccctgaaagatttagatgaagatggaatcattcgtgttggtgcggaagtt
cgtgatggggacattttagttggtaaagttacgccaaagggtgttacggaattatctgct
gaagaacgtttattgcatgctatttttggtgaaaaagctcgtgaagttcgtgatacttcg
ttacgtgtacctcatggtggcggtggaatcgtccaagatgttaaagtcttttctcgtgaa
gaaggcgatgaactaagcccaggtgttaattctatggtgcgaatttatattgcacaaaaa
cgtaaaattcaagttggcgataaaatggctggtcgtcatggtaacaaaggtacagtttcc
attgttgttcctgaagaagatatgccatatatgcctgatggtacaccagtagatatcttg
ttgaatccaatgggtgttccttcacgtatgaacattggtcaagttttggaattgcatttg
ggaatggcagcacgcaacttgggaattcatgtagcaacgccagtttttgatggtgttaat
gatgatgatttgtggaaagctgttcaagaagctaatatggcttcagatgctaaaactgtt
ttgtatgatggtcgtaccggtgaaccgttccataatcgtgtggctgttggtgttatgtat
tatatgaaattagcccatatggttgacgacaagatccatgctcgatcaattggaccttac
tccttagttacgcaacagccattaggtggtaaggcacaatttggtggtcagcgttttggt
gaaatggaagtttgggcactggaagcgtatggtgctgcctacacgctacaagaaattttg
acttacaaatctgatgatgtcactggtcgtgtaaacacttatgaagctattgtgaagggc
gaaacgattcctaagccaggtgtgccagaatcatttagagttttagtgaaagaattagag
tcgcttggactagatatgaagattttggatcatgagaataaagaagttgaacttcgggaa
atggatgaagatccgactattaaaagtattgatgctttgtctaaattagctttagagcaa
gaacaaaagttagttcaagaagaagctgataaaaagcaagatgatcaagaaatagaagct
caagaagaaccagaactagaaaaagtgatggatcaaatgatcaatagtaatactgacgct
tctaacaatgatgaacaatag
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