Bombilactobacillus thymidiniphilus: MOO47_02355
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Entry
MOO47_02355 CDS
T08331
Name
(GenBank) pectate lyase
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
bog
Bombilactobacillus thymidiniphilus
Pathway
bog00040
Pentose and glucuronate interconversions
bog01100
Metabolic pathways
bog02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
bog00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
MOO47_02355
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
MOO47_02355
Enzymes [BR:
bog01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
MOO47_02355
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Motif
Pfam:
Pectate_lyase_4
DUF3685
Motif
Other DBs
NCBI-ProteinID:
UQS84045
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Position
433237..434526
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AA seq
429 aa
AA seq
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MIKFKKLWLTAAIFLAGSATLANNKVAAADTLEPAINQQARQIAGKDNGFASGTTGGFQA
DTKHTFVVRNREQLVKALKKNKNGEDLLIVVDGKINMNADSQGRELTADDYADPDYNLPD
YLKAYDPQNWGYDKVPSGKLEEARYRSQKNQNKQITVNIPSNTTIFGINNAAIDGGNLNL
KNSTNIIIRNISFETPYDFFPQWDPTDDEFGNWNSEYDSITIKGAQKVWLDHNYFTDGKH
PDSESEKYFGRKYQHHDGVMDIVNGADYITISNSKITNHDKTMLIGNSDSKTSDRGKLHV
TLNDNIFEDIVQRQPRVRFGQVHLFNNYFTNTNQSGYQAKYIIGAGFESQVLAENNAINI
AKMKQKNIIKNFKATNLTMKQTLFNDHLLLDNGIEQGFNPVTWQPPYNYVLKDTQTIEAS
TTSNAGPIL
NT seq
1290 nt
NT seq
+upstream
nt +downstream
nt
atgatcaaattcaaaaaattgtggcttacagcagctatttttttagctggtagtgctaca
ctggcaaataacaaggttgccgcagcagatacactagaaccggctattaatcaacaagct
agacaaattgcaggcaaagacaatggttttgcctctggtactactggtggctttcaagcc
gacactaagcatacttttgtcgtacgtaatcgtgaacaattagtcaaggcattgaaaaaa
aataaaaatggtgaagacttattgattgttgtcgatggtaaaatcaatatgaacgccgat
agtcaaggacgtgaattaacagccgacgactatgcggatcctgattacaatttgcccgat
tatttaaaagcctatgatccacaaaactggggctatgataaagttcctagtggtaaatta
gaagaagcgcgttatcgttctcaaaaaaatcaaaataagcaaatcacagtgaacattcct
tctaatacaactatttttggcatcaacaatgccgcaattgatggtggcaatctgaatttg
aagaatagcaccaatattattatccgtaacatctcttttgagacaccatacgactttttc
ccacaatgggatcctaccgatgatgaattcggtaattggaactctgagtatgacagcatc
acaatcaaaggtgcgcaaaaagtttggttagatcacaattattttactgatggtaaacat
cctgacagtgaatcagaaaaatattttggtcgtaaatatcaacatcatgatggtgtgatg
gatattgttaatggtgccgattatattactatttctaatagtaaaattactaaccatgat
aaaacgatgctaattggaaacagtgattccaaaacttctgatcgcggcaaattgcatgtt
actttaaatgataatatttttgaggatattgtccaacgtcaaccgcgcgtacgctttggt
caagttcatttgttcaataattattttacaaatactaatcaatccggttatcaagctaaa
tatatcattggtgctggctttgagtcccaagttctcgcagaaaataatgcaattaatatt
gccaaaatgaaacaaaagaacattatcaaaaatttcaaagctactaatttaactatgaaa
cagacccttttcaatgatcatttattacttgataatggtatcgaacaaggatttaatcct
gttacttggcaaccaccttataactatgtgttaaaagatactcaaacaattgaggctagc
acaacttccaacgctggtcctattttataa
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