Bombilactobacillus thymidiniphilus: MOO47_02725
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Entry
MOO47_02725 CDS
T08331
Symbol
rpoN
Name
(GenBank) RNA polymerase factor sigma-54
Organism
bog
Bombilactobacillus thymidiniphilus
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Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
HTH_23
HTH_6
HTH_24
LacI
Rv2175c_wHTH
Sigma70_r4
MarR_2
HTH_1
HTH_Tnp_ISL3
HTH_17
Motif
Other DBs
NCBI-ProteinID:
UQS84085
UniProt:
A0ABY4PEM3
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Position
complement(491986..493230)
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AA seq
414 aa
AA seq
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MDLLQKPQLQQHLFLSMQMQQALHLLQSDLVDLTAYVKEQSLSNPLFEVQDFGDVLNWAT
PQAQNVDIIDYLLPQIKLRSYTVQEQRLLSYFLVNLDEHGYLALSPTDFKMQYHLTDQQF
KVGQQLLAQLEPAGIGLTGVRTYFLQQLAEQKETLAYQIVQNYWELLIKRQWTEISQRLH
QPLSQIKKALHILQLLRRYPYEIASMHMQTTIVPDLILQVDQQHLQLSVSVSGQPRLIFA
QETYEHLQNSADLEVRQYVQSKYRAYQSLLSGLRQRSRTLAAVGTVIVATQKDFLLQKED
TLQPLLLRDVATRLHISESTVSRAIKDKYLQTRHGILALKDCFSRPVKYATELSTITVQK
RLQALIKTENHSHPFSDQQLAILLQKQGVQLARRTVTKYRQALAIGNTQQRKKA
NT seq
1245 nt
NT seq
+upstream
nt +downstream
nt
atggatttactacaaaaaccgcaattacagcagcatttatttttgtcgatgcaaatgcaa
caagctttacatttattacagagtgatttagtggatctgacagcttatgttaaagaacaa
agcttgagtaatccattgtttgaggtgcaagattttggtgatgtgttgaattgggcaaca
ccgcaggcgcaaaatgttgatattattgattatttgttgccacaaatcaaattacgaagc
tatacagtacaagaacagcgcttgctcagttattttctagttaatttagatgagcatggt
tatttagcattgtcgccaactgattttaaaatgcaatatcatttgacagatcagcaattt
aaagtaggacaacaattgttagcacaattagaaccagccggcatcggattaacgggagtg
cgcacttattttctacagcaattagccgagcaaaaagaaacacttgcttaccaaattgtt
caaaattattgggagttattgattaagcggcagtggacagaaattagtcaacgattgcac
cagccgttgtcccaaatcaaaaaagcattacatatcttacagttgttacgacgctatcct
tatgaaattgcgtcaatgcacatgcaaactacaatagtgcctgatttgattttacaagtt
gatcagcaacatttgcagctgagtgttagtgttagtgggcaaccgcgacttatttttgcg
caggaaacttatgaacatttgcaaaatagcgcagatttagaagttaggcaatatgtacag
tctaaatatcgagcatatcaatctttactaagcggattaagacagcgttcgcggactcta
gcagcagtaggtactgtcattgtcgcgactcaaaaagactttttattgcaaaaagaagat
actttgcaacccctattgctgcgtgatgtagcaacacgtttgcacatcagtgaatcaaca
gtcagccgagcgattaaagataagtatttacaaactcgtcacggaattttagcacttaaa
gattgtttcagtcgcccggttaaatatgcgacagaattatcgactattaccgtgcaaaaa
cgtttacaagcactaattaaaacagaaaaccatagtcatcctttcagcgatcaacagtta
gcgatactattgcaaaaacaaggagtacaactagcccgacgcacggtgacgaaatatcga
caagcattagcgattggtaatactcaacaacgaaaaaaagcgtag
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