Bombilactobacillus thymidiniphilus: MOO47_02725
Help
Entry
MOO47_02725 CDS
T08331
Symbol
rpoN
Name
(GenBank) RNA polymerase factor sigma-54
Organism
bog
Bombilactobacillus thymidiniphilus
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
HTH_IclR
HTH_6
HTH_24
Rv2175c_wHTH
HTH_23
MarR_2
Sigma70_r4
LacI
HTH_Tnp_ISL3
HTH_1
HTH_17
Motif
Other DBs
NCBI-ProteinID:
UQS84085
LinkDB
All DBs
Position
complement(491986..493230)
Genome browser
AA seq
414 aa
AA seq
DB search
MDLLQKPQLQQHLFLSMQMQQALHLLQSDLVDLTAYVKEQSLSNPLFEVQDFGDVLNWAT
PQAQNVDIIDYLLPQIKLRSYTVQEQRLLSYFLVNLDEHGYLALSPTDFKMQYHLTDQQF
KVGQQLLAQLEPAGIGLTGVRTYFLQQLAEQKETLAYQIVQNYWELLIKRQWTEISQRLH
QPLSQIKKALHILQLLRRYPYEIASMHMQTTIVPDLILQVDQQHLQLSVSVSGQPRLIFA
QETYEHLQNSADLEVRQYVQSKYRAYQSLLSGLRQRSRTLAAVGTVIVATQKDFLLQKED
TLQPLLLRDVATRLHISESTVSRAIKDKYLQTRHGILALKDCFSRPVKYATELSTITVQK
RLQALIKTENHSHPFSDQQLAILLQKQGVQLARRTVTKYRQALAIGNTQQRKKA
NT seq
1245 nt
NT seq
+upstream
nt +downstream
nt
atggatttactacaaaaaccgcaattacagcagcatttatttttgtcgatgcaaatgcaa
caagctttacatttattacagagtgatttagtggatctgacagcttatgttaaagaacaa
agcttgagtaatccattgtttgaggtgcaagattttggtgatgtgttgaattgggcaaca
ccgcaggcgcaaaatgttgatattattgattatttgttgccacaaatcaaattacgaagc
tatacagtacaagaacagcgcttgctcagttattttctagttaatttagatgagcatggt
tatttagcattgtcgccaactgattttaaaatgcaatatcatttgacagatcagcaattt
aaagtaggacaacaattgttagcacaattagaaccagccggcatcggattaacgggagtg
cgcacttattttctacagcaattagccgagcaaaaagaaacacttgcttaccaaattgtt
caaaattattgggagttattgattaagcggcagtggacagaaattagtcaacgattgcac
cagccgttgtcccaaatcaaaaaagcattacatatcttacagttgttacgacgctatcct
tatgaaattgcgtcaatgcacatgcaaactacaatagtgcctgatttgattttacaagtt
gatcagcaacatttgcagctgagtgttagtgttagtgggcaaccgcgacttatttttgcg
caggaaacttatgaacatttgcaaaatagcgcagatttagaagttaggcaatatgtacag
tctaaatatcgagcatatcaatctttactaagcggattaagacagcgttcgcggactcta
gcagcagtaggtactgtcattgtcgcgactcaaaaagactttttattgcaaaaagaagat
actttgcaacccctattgctgcgtgatgtagcaacacgtttgcacatcagtgaatcaaca
gtcagccgagcgattaaagataagtatttacaaactcgtcacggaattttagcacttaaa
gattgtttcagtcgcccggttaaatatgcgacagaattatcgactattaccgtgcaaaaa
cgtttacaagcactaattaaaacagaaaaccatagtcatcctttcagcgatcaacagtta
gcgatactattgcaaaaacaaggagtacaactagcccgacgcacggtgacgaaatatcga
caagcattagcgattggtaatactcaacaacgaaaaaaagcgtag
DBGET
integrated database retrieval system
