Bombilactobacillus thymidiniphilus: MOO47_02735
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Entry
MOO47_02735 CDS
T08331
Name
(GenBank) AAA family ATPase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
bog
Bombilactobacillus thymidiniphilus
Pathway
bog03420
Nucleotide excision repair
bog03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
bog00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
MOO47_02735
03430 Mismatch repair
MOO47_02735
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bog03400
]
MOO47_02735
Enzymes [BR:
bog01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
MOO47_02735
DNA repair and recombination proteins [BR:
bog03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
MOO47_02735
MMR (mismatch excision repair)
Other MMR factors
MOO47_02735
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD_C_2
AAA_19
Viral_helicase1
UvrD_C
UvrD-helicase
DEAD
AAA_14
AAA_11
NACHT
AAA_16
AtuA_ferredoxin
Sod_Cu
NPHP3_N
Motif
Other DBs
NCBI-ProteinID:
UQS84087
LinkDB
All DBs
Position
complement(494647..496947)
Genome browser
AA seq
766 aa
AA seq
DB search
MTTMDVKQQEQAHLEEVKKKISQAQAKLAKSMKTAKADIKEIDRTFSDDLHVGVGDDSIS
MAGALSIHQQQQMLAERNNSWQRSQQQLGVLQKLAKTPYFARIDFQELPSGKPETIYIGL
ASFSDVQDHFLVYDWRAPISSIYYDGDLGEITYQTPDGPQAVDVNLKRQFIIEDGQIKTL
YDTEETIGDQMLLEVLDQRASTQMKGIATTIQREQNQIIRDTDSDLLFVQGAAGSGKTSA
IMQRIAYLLYRYRKRLTSGQVVMFSPNMLFNDYISQVLPEMGEQNMVQLTYLQYVARRLP
KLKLQTLFEQFEQNMQHNNTAVTQFITDLDFFKLLTNYAQILSSGGVYFRDLRFRNQVLI
SHEQIANIYYSFGPQYKLVNRIDGTRQKLLRLLNKKMKQQKRKDWVQEKIEALSQEQLRS
LYDNPDQEFANSDDEQNFLAQKIVLEAFEPLAHRIRQNSFINLTQTYRKFLQVVPQLVVL
ENYQLTKAQWQMYTQQFQQNLQMKKITINDISPYLYLYDLITGRHGDNNMKFVFIDEIQD
YTPFQLAYLKYNFPKARYTLLGDLNQSIFVQDSAGTLLKEIQQLFAGDKTKVVQLTHSYR
STKPITEFTKKLLLRGEKISSFERNGDLPNIAVVADQQAMLQAAQKQLQLNDQQNYATAI
ITKDLQQAQQVYRQLQDNQVATTLIRSENQRLAAGNIVIPAYLAKGLEFDAVIMWNMSAG
QFTAQDRQLIYTIASRAMHRLTILAVEQLDSIIAAVPKQLSQKSFF
NT seq
2301 nt
NT seq
+upstream
nt +downstream
nt
atgacaactatggatgttaagcaacaagaacaagcacatttggaagaagttaaaaagaag
atttctcaagcgcaagctaaattagctaaaagtatgaaaacagctaaagctgatattaaa
gaaattgatcgtacttttagcgatgatttgcacgttggggtgggcgatgattcgatttcg
atggcgggagctttatctattcaccagcaacagcagatgttggctgaacgtaataattct
tggcaacgctcacaacagcaattaggagttttacaaaagttagccaagacgccttatttt
gcacgaattgattttcaagagttaccatctggtaaacccgaaactatctatattggttta
gcgtcgtttagtgatgtgcaagatcactttttggtttatgattggcgtgcgccgatctct
tcaatctattatgatggtgatttaggtgaaattacctaccaaacacctgatggtccccaa
gcagttgatgtgaatttgaagcgccaatttattattgaagacggtcaaattaagacactg
tatgatactgaagaaacaatcggcgatcagatgttgctagaagtgttggatcaacgagct
agtacacaaatgaagggtatcgcgacaaccattcagcgcgaacaaaatcaaattattcgc
gatactgactctgatttattgtttgttcagggggctgcaggttctggtaaaacatcagct
attatgcagcgaattgcgtatttgttgtatcgttatcgcaaacgtttaacttccggacaa
gtcgtcatgttttcgccaaatatgttatttaatgattatattagccaggttttgccagag
atgggtgaacagaatatggtgcaattgacatatttacagtatgttgcacggcgcctgcct
aagttgaaattacaaactttatttgaacagtttgagcagaatatgcaacacaataataca
gccgtgacgcaatttatcacggacttagatttctttaagttgcttactaattatgcgcaa
attctcagtagtggcggtgtttattttcgtgatttgcgttttcgcaatcaagttttaatt
tcccacgagcaaattgcgaatatctattatagttttggtccgcaatataagctagtgaac
cgaattgatggaacgcgccaaaagttattgcgattgttaaataagaaaatgaagcaacaa
aagcgcaaagattgggtacaagaaaagattgaagcactaagccaagagcaattgcgatct
ctatatgataatccagatcaagaatttgctaatagcgatgatgaacaaaattttctcgca
caaaagattgtgctggaagcctttgaacctttggcacatcgtatccgacaaaatagcttc
attaacctgacccaaacttatcgcaagtttttgcaagtagtgccccaactagtggtgttg
gaaaactatcagttgactaaagcgcagtggcaaatgtatacgcaacagtttcaacaaaat
ctccaaatgaaaaaaattacgattaatgatatttcgccttacttatatttgtatgattta
ataacaggacgccatggcgataataatatgaagtttgtctttattgatgaaattcaagac
tatacgccttttcaattggcttacttgaaatataattttcccaaggcacgctatactttg
ttgggcgatttgaaccaatctattttcgtgcaagatagtgcaggaacattattgaaagaa
attcaacaattgtttgcaggcgacaagactaaagtggtgcagttgacacattcttatcgt
tccactaagccaattactgaatttacaaagaaattattgttgcgtggtgagaaaatttct
tcctttgaacgcaatggtgatttgcctaatattgcggtggttgctgatcaacaagcgatg
ttacaagctgctcaaaaacaactgcagttaaatgatcaacaaaattatgccaccgcgatt
attactaaagatttgcagcaagcccagcaagtatatcgccaattacaagacaatcaagtt
gcgacaactttgatccgttcggaaaatcagcgcttagcggcaggaaatattgtaatcccc
gcttatttggctaagggcttagagtttgatgcagttattatgtggaatatgagtgctgga
caatttactgcgcaagatcgtcaattaatttataccattgcttcacgtgcaatgcaccgg
ctgaccattttggcagttgaacaattagattcgattattgcggcagtgcccaagcagtta
tcccaaaaaagctttttttaa
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