Bombilactobacillus thymidiniphilus: MOO47_05500
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Entry
MOO47_05500 CDS
T08331
Symbol
pcrA
Name
(GenBank) DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
bog
Bombilactobacillus thymidiniphilus
Pathway
bog03420
Nucleotide excision repair
bog03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
bog00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
MOO47_05500 (pcrA)
03430 Mismatch repair
MOO47_05500 (pcrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bog03400
]
MOO47_05500 (pcrA)
Enzymes [BR:
bog01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
MOO47_05500 (pcrA)
DNA repair and recombination proteins [BR:
bog03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
MOO47_05500 (pcrA)
MMR (mismatch excision repair)
Other MMR factors
MOO47_05500 (pcrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
PcrA_UvrD_tudor
AAA_19
UvrD_C_2
AAA_30
Viral_helicase1
AAA_11
ResIII
DUF2067
Motif
Other DBs
NCBI-ProteinID:
UQS83232
UniProt:
A0ABY4PD74
LinkDB
All DBs
Position
1077790..1080027
Genome browser
AA seq
745 aa
AA seq
DB search
MSDAAILQGLNDKQQLAVSTTQGPLLIMAGAGSGKTRVLTHRIAYLIQDRQVLPWHILAI
TFTNKAAREMQERVQKLLGESAQGVWVSTFHSMCVRILRREAEAIGYSRAFTITGSSEQL
TLVKQILKRLNLDPKKYDPRSLLHIISNAKNSVQTPEDYQKVAASPFEKIAVDVYQQYQK
SLQDNQSMDFDDLIMQTIILFQTNPQVLQYYQDKFQYIHVDEYQDTNDAQYQLIYLLAQK
HQNLCVVGDGDQSIYGWRGANMDNIMNFEKDYPTAQTILLEQNYRSTQNILQAANDVIAH
NNYRKPKKLWTDNPAGELITYYRAATEKDEAIYVIEQIKKLQQEQNYHLTDFAILYRTNA
QSRILEDRLLKANLPYKIIGGHKFYDRKEIKDTLAYLQLIANPKDSLSFQRIINEPKRGI
GAGSLEKLQSVALEQDWSLLEVALNADTVGNLTTRVKNNLQKFAQFITELIDNRAGQSMT
ELLTQTLEKSGYVAELERQDTLEAQTRLENIQELLTVTQQFDKDYQPEDENADRLVDFLA
DLALVSSEDRTDDKQDQLTLMTLHAAKGLEFPVVFLVGMEEGIFPLSRSLTDDNELEEER
RLAYVGITRAQTKLYVTSAWSRMLYGRTQSNVQSRFIDEISTDLLDVQNNSNMQQMEADY
PFENSARSVRRPRKHNQPPKAPEVMNHFATETIIWQVGDQVQHKKWGTGTVVKVTGSGEN
TELDVAFSEQGIKRLLAEFAPIQKV
NT seq
2238 nt
NT seq
+upstream
nt +downstream
nt
atgtctgatgcagcgattttgcaaggcttaaatgataaacagcaattagctgtcagcaca
acgcaaggtccgctattaattatggcaggagctggcagtggtaaaactagagttttgaca
caccgtattgcttatttaattcaagataggcaagttttgccgtggcatattttagcaatt
actttcactaataaagcggctcgtgaaatgcaagaacgagttcagaaattattaggtgaa
agtgctcaaggtgtttgggtatctacttttcattcaatgtgtgtacgaattttgcgccgt
gaagctgaagctattggttatagtcgtgcttttacaatcactggttcgtcggaacaatta
actttggtaaaacagatcttgaagcgtttaaatttagaccctaagaaatatgatccacgt
tcacttttgcatattattagcaatgctaaaaacagtgtgcagacaccggaagattatcaa
aaagtggctgcttcaccgtttgaaaagatcgcggttgatgtttatcaacaatatcagaaa
agtttgcaagataatcaaagcatggattttgatgatttgattatgcagacgattatttta
ttccaaactaatccgcaagttttgcaatattatcaagataaatttcagtatattcacgtt
gatgaataccaagataccaatgatgcacaatatcagttaatttatttattagcacaaaag
caccaaaatctatgtgtagttggcgatggtgatcagagtatttatggttggcgtggtgca
aatatggataatattatgaactttgagaaagattatcctacagcgcaaacgattttgttg
gagcaaaattatcgttccacgcaaaatattttgcaagcagccaatgatgttatcgcgcat
aataattaccgtaagcctaaaaaattgtggactgataatccagccggagaattgattact
tattatcgcgctgctacagaaaaagacgaagcaatttatgtgattgagcaaattaaaaaa
ttgcaacaagagcaaaattatcatttaactgattttgccattttatatcgaactaatgcc
caatcgcgtattttagaggatcgtttattaaaagccaatttaccttacaagattataggt
ggacataaattttatgatcgtaaggaaattaaggatactttagcttatttacagttgatt
gctaatcctaaggattctttgagttttcagcgaatcattaatgagcctaaaagaggaatt
ggtgccggttcgttagaaaagttgcagtctgtggctttggagcaagattggagtttgtta
gaagttgctttgaatgctgatacggtaggtaatttgactacgcgtgtcaaaaataattta
caaaaatttgcccaatttattaccgaattgattgataatcgtgcgggacaatcaatgact
gagttactgacacaaactttagaaaaaagtggttatgtcgcggaattagagcgacaagat
acattggaagcgcaaacccgcttagaaaatattcaagaattattgacagttacccagcaa
ttcgataaagattatcaacctgaagacgaaaatgctgaccgtttggtagattttctagct
gacttagccttagttagcagtgaagatcgtactgatgacaaacaagatcaattgacctta
atgactttgcacgcagccaaaggattggaatttccggtagtctttttagttggaatggaa
gagggaattttcccattatcgcgttctctaacagatgacaatgagctggaagaagaacgc
cggctagcttatgtgggaattacgcgagcacaaactaaattatatgtaactagcgcttgg
tccagaatgttgtatggacgcacgcaaagtaatgtacaatcacgctttatagatgaaatt
agtactgatttgttggatgtgcaaaataattctaatatgcagcaaatggaggccgactac
ccatttgagaattctgcacgttcagtgcgtcgaccacgtaagcataatcagccacctaaa
gcgcctgaagtaatgaaccattttgcgaccgaaacgatcatttggcaagtcggtgatcaa
gttcaacataaaaagtggggtacaggtacagttgtcaaagtaaccggtagcggtgaaaat
actgaattggatgttgcctttagtgaacaaggtattaaacgcctattagctgagtttgcg
ccaattcaaaaagtatag
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