Bombilactobacillus thymidiniphilus: MOO47_06070
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Entry
MOO47_06070 CDS
T08331
Name
(GenBank) HD domain-containing protein
KO
K03698
3'-5' exoribonuclease [EC:3.1.-.-]
Organism
bog
Bombilactobacillus thymidiniphilus
Brite
KEGG Orthology (KO) [BR:
bog00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bog03019
]
MOO47_06070
Messenger RNA biogenesis [BR:
bog03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
MOO47_06070
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HD
tRNA_anti-codon
TraI_2
Motif
Other DBs
NCBI-ProteinID:
UQS83340
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All DBs
Position
1199867..1200823
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AA seq
318 aa
AA seq
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MMTQKIAELKVNDSFELPVLIKQADVRLTKNGKQFLALVFTDDTGTINGKYWDASATDVE
MFQTGKIVLLSGKCELYNQVMQVKITSLKLAENDQYSITQFMPHAPISKQQLQEKINDLV
LRITKPHWNRVVRYLLQKHQITFFDFPAAKSNHHDYAGGLAFHTISIAHLALAVCKQYPQ
INEALLIAGVLLHDLGKTSELSGSVGTQYTLAGNLLGHIVIIDEEIVAACTQLKIDAQAE
DMLLLRHLIIAHHGLNEYGSPKRPQLLEADVLHQLDELDASINMISKATAKTASGNFSEP
VFGLDKRRFYVSSDDDVM
NT seq
957 nt
NT seq
+upstream
nt +downstream
nt
atgatgacgcaaaaaatagcggaattaaaagttaatgatagttttgaattgccagtttta
attaagcaagccgatgttcggctaactaaaaatggtaaacagtttttagctttagttttt
acagatgatacgggaaccatcaatggaaaatattgggatgcttccgccactgatgtagaa
atgtttcaaacaggtaaaattgtcctgctaagcggcaaatgtgaattgtacaatcaagtt
atgcaagttaaaattactagtttgaagctagcagagaatgatcaatattcaattacgcaa
ttcatgccacatgctcctattagcaagcaacaattacaagaaaaaattaatgatttggtt
ttacgtattactaaaccacattggaatcgcgtagtacgttatttattacaaaaacatcaa
ataactttttttgattttcccgctgccaagtccaatcatcatgattatgctggtggattg
gcatttcatactatcagcattgctcatttggcattagctgtttgcaagcaatatcctcaa
atcaatgaagcattgttaattgctggagtgctattgcatgatttaggcaaaactagtgaa
ttaagtggttctgttggtacccagtatactttggcgggaaatttattaggtcatatcgtg
attattgatgaagaaattgttgcagcttgcacacaacttaaaattgatgcacaagctgaa
gatatgttgctcttgcgtcatttgattattgctcatcatggtttaaatgaatatggttca
cctaagcgtccacaactattggaagcagatgttttacatcaattagatgaattagatgct
tcaattaatatgattagcaaagcgactgctaaaacggcatcaggtaatttcagtgaacca
gtttttggtttggataaacgccgattttatgtttctagtgatgatgatgttatgtaa
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