Bombilactobacillus thymidiniphilus: MOO47_06125
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Entry
MOO47_06125 CDS
T08331
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
bog
Bombilactobacillus thymidiniphilus
Pathway
bog03030
DNA replication
bog03410
Base excision repair
bog03420
Nucleotide excision repair
bog03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bog00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
MOO47_06125 (polA)
03410 Base excision repair
MOO47_06125 (polA)
03420 Nucleotide excision repair
MOO47_06125 (polA)
03440 Homologous recombination
MOO47_06125 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bog03032
]
MOO47_06125 (polA)
03400 DNA repair and recombination proteins [BR:
bog03400
]
MOO47_06125 (polA)
Enzymes [BR:
bog01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
MOO47_06125 (polA)
DNA replication proteins [BR:
bog03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
MOO47_06125 (polA)
DNA repair and recombination proteins [BR:
bog03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
MOO47_06125 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
MOO47_06125 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_polI_exo1
5_3_exonuc
DNA_pol_A_exo1
NYN_YacP
TraI_hel_assoc_N
HHH_5
FTHFS
baeRF_family10
baeRF_family2
Motif
Other DBs
NCBI-ProteinID:
UQS83351
LinkDB
All DBs
Position
1208241..1210901
Genome browser
AA seq
886 aa
AA seq
DB search
MNSKKLVLVDGNSIAFRAFFAMHNVLEKFKNADGLHTNAIYAFNNMLDLILSKSKPTDML
VAFDAGKTTFRTKMYADYKGNRPHTPSEFSEQLPCIKELLTARGIKSYELANYEADDIIG
TMARTAQKQGYQVVVVTGDRDLTQLVTDQITVAVTIKGVSDLEFYTPEHFQEKLGITPEQ
LIDLKALMGDNSDNYPGVTKVGEKTGLKLLKQYGSLENLYANLDMMKPSKLKEHLQSDQE
QAFLSKKLATIDTAAPVQLDLADLAYAGDQEEQLIPLYRKLNFRSFLDKMKVPFDPNHME
SQQQINYQILDATTLPDLIETTTPVSVVVEMIEDNYHTAPIIGLAFASSEQVWVSDDAGL
LADASFKQWLQDAAKAKYVFDFKRDYVALHRYGAILDGVLFDVLLGSYLLDVNDNSNDLG
SLAQTYGYSGLLPDIEFYGKGARKAVPQSAQLLEHLASKAAAIRYLQTKLPEQLRQHDQD
QLFEEIELPLAQVLADMEIDGVRVDPTILYKMQNQLGERLQQLQNDIYQQAGKEFNINSS
QQLSKILFEDLGLKPLKKTKTGYSTSVEVLEKLRDQAPIVADILNYRQVAKIQSTYVGGL
LNSIAPDGRVHTRYLQTLTQTGRLSSVDPNLQNIPARLDEGRKIRQAFVPKQADWEIFSS
DYSQIELRVLAHLSGDQNMQQAFKENYDIHAHTAMRIFGLDDIAEVTPNMRRKAKATNFG
IVYGISDYGLAKNIGISRTEAAQFIQSYFDQYPDVKKYMDQMVQLARENGYVETIMHRRR
YLPDIHARNFNLRSFAERTAMNTPIQGSAADIIKIAMINMQKQLRQRDLKARMLLQVHDE
LIFEAPEDEIPILEKLVPQIMDSAVQLDVPLKVSSAHGKSWYDAKG
NT seq
2661 nt
NT seq
+upstream
nt +downstream
nt
atgaattcaaaaaaattagttttagttgatggcaatagtatcgcctttcgagcctttttt
gccatgcacaacgttttagagaaattcaaaaatgctgatggtctgcataccaatgctatt
tatgcttttaacaatatgctggatttgattttgtctaaaagtaaaccgacagatatgtta
gttgcttttgatgctggaaagacgacttttagaactaaaatgtatgccgattataagggc
aatcgaccacatacaccgagtgaatttagtgaacagcttccttgtatcaaggaattatta
actgctagaggcattaaaagttatgaattagctaattatgaggcagacgatattattgga
acgatggcacgtactgcgcaaaagcaaggttaccaagttgtagtagtaactggtgaccgt
gatttgacacagttggttactgatcaaattactgtagcagtaactatcaaaggagtgtct
gatctagagttttacacaccggaacattttcaagaaaaattagggattacaccagaacaa
ttaattgatttaaaggctttaatgggagataattcggacaattatccaggtgtgactaaa
gttggcgaaaagacaggactaaagttgcttaagcagtatggttcgctagaaaatctctat
gctaacttggatatgatgaagccgagtaaattaaaagagcatctgcaaagtgatcaagaa
caggctttcttgtctaaaaaattagcgacgattgatactgctgctccggtgcagcttgat
ttagcagatttggcatatgcaggtgatcaagaagagcaactgattcccctttatcgtaaa
ttaaatttccggtcttttttagataaaatgaaagtgccatttgatcctaatcacatggaa
agccaacaacaaattaactaccaaatactagacgcaacaactttgccagatttaattgaa
acgacgaccccagttagtgtagtagtggaaatgattgaagataactatcatactgcgcct
atcattggtttagcatttgctagtagtgaacaagtttgggtgagcgatgatgctggtttg
ctagctgatgcgtcatttaaacagtggctacaagatgctgctaaagccaaatatgtattt
gattttaaacgagattacgtcgcattacatcgctatggtgctattttggatggagtgctg
tttgatgttttacttggctcatatttgttagatgttaatgataactcaaatgacttggga
tcgttagcacagacttatgggtacagtggcttattgccagatattgaattttacggtaaa
ggtgccagaaaggctgttcctcaaagtgcacaactgttggagcatctagctagcaaagct
gctgcaatcagatatttgcaaactaagttgcctgagcaactacgccaacatgatcaagat
caattgtttgaagaaattgaattaccgttggcacaagtcctagctgatatggaaattgat
ggtgtgcgtgttgatccgactattttgtacaaaatgcaaaatcaattaggcgaacgttta
caacaattgcaaaatgatatttatcagcaagcaggtaaagagtttaatattaattcttca
cagcaattgagtaaaattttatttgaagatttaggattgaaaccactcaaaaaaaccaaa
actggttattcaacgtcggttgaagttctggagaaattacgcgatcaagcgcctattgtg
gcagatattttaaattatcgtcaagttgctaaaattcaatccacttatgttggcggttta
ttgaattcaattgcacctgatggacgcgtgcatacacgttatttacaaacattaacgcaa
acagggcgtttgtcgtcagttgaccccaacttacaaaatattcctgctcgtttagatgaa
ggacgtaaaattagacaggcttttgtgcctaagcaagctgattgggaaatcttttcgagt
gattattcgcaaattgaactgcgtgttttagcacatttatcgggcgatcaaaatatgcaa
caagcttttaaagaaaattatgatattcatgcacacacggcaatgcggatttttgggttg
gacgatatagctgaagtgacaccaaatatgcgccgcaaagccaaagctactaattttgga
attgtatatggcattagtgattatggtttagccaaaaatattggaatttctcgcactgaa
gctgcacaatttattcaatcttattttgatcaatatccggatgttaaaaaatatatggat
caaatggtgcaattggcgcgcgaaaatggttatgtggaaacaatcatgcatcgacgccgt
tatttgcctgatattcatgctcgtaattttaatttacggtcttttgcggagcgaacggcg
atgaacacaccaattcaaggtagtgcagcagacattattaagattgcaatgattaatatg
caaaagcaattgcgccaacgagatttgaaagcgcggatgctcttgcaagttcacgatgaa
ttgatttttgaagctccagaagatgaaattccaatattagaaaaattagtaccgcaaatt
atggattcagcagtgcagctggacgtacctttaaaagtatcgtctgcgcatggtaaaagt
tggtatgatgctaaagggtag
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