Bombilactobacillus thymidiniphilus: MOO47_06130
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Entry
MOO47_06130 CDS
T08331
Symbol
mutM
Name
(GenBank) DNA-formamidopyrimidine glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
bog
Bombilactobacillus thymidiniphilus
Pathway
bog03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
bog00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
MOO47_06130 (mutM)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bog03400
]
MOO47_06130 (mutM)
Enzymes [BR:
bog01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
MOO47_06130 (mutM)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
MOO47_06130 (mutM)
DNA repair and recombination proteins [BR:
bog03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
MOO47_06130 (mutM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
NFACT_N
Zn_ribbon_6
HscB_4_cys
Ribosomal_S13
Motif
Other DBs
NCBI-ProteinID:
UQS83352
LinkDB
All DBs
Position
1210983..1211813
Genome browser
AA seq
276 aa
AA seq
DB search
MPELPEVETVRRGLNKMIIGQKITAIDILYDKIIVGDVDTFKEQLIDATIAYVGRRAKYL
LFNFDNGLTMISHLRMEGKYQVRSKISDFDKHVHIIFHLSNGEYLGYRDVRKFGRMQLVD
TNDVTKVKSIALLGPEPLTPEFTYQSLLEGLKSTRKTVKATLLDQHVVSGLGNIYADEVL
WLAKVHPEQPANELTTQQVKDLHNGINEDIKKAIDAGGTTIRSYVDATGHSGEFQFQLNV
YGRQGKPCKRCETIIEKIKVAGRGTHFCPHCQVLQS
NT seq
831 nt
NT seq
+upstream
nt +downstream
nt
atgcctgaattacctgaagtggaaacagttcggcgcggtttaaataaaatgattatcggt
caaaagataacggctattgatattttatacgacaagattattgttggtgatgtggacact
tttaaagaacagttaatagatgcaacaattgcctatgttggtcgacgtgctaaatactta
ctcttcaattttgacaatggcttgacgatgattagtcatttgcgcatggaaggcaagtat
caagttcgttctaagattagtgactttgacaaacatgtgcacattatttttcatttgagt
aatggagagtatttgggttatcgtgatgtccgtaaatttggtcgtatgcaattggtagac
accaatgatgtgacaaaagtgaagtcgatcgctttattagggccggaaccattgacacca
gaatttacttatcaatctttattagagggtctaaagagtacgagaaaaactgtaaaagca
actttattagatcagcatgtagtttctgggttgggcaatatttatgcggacgaagttttg
tggcttgctaaagttcatcccgaacaaccagctaatgaattgaccacacagcaagtgaaa
gatttgcataatggaatcaatgaagatattaaaaaagcaattgatgccggtggcacaaca
attcgcagttatgttgatgccacaggacatagtggtgaatttcagtttcaattgaatgtt
tatggacgacaaggtaagccttgcaagcgctgtgagacgattattgaaaaaattaaagta
gctggtcggggaacgcatttttgtccacactgccaggttttgcagtcatga
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