Bordetella sp. H567: AKI39_00745 Help Entry AKI39_00745       CDS       T04979                                  Name (GenBank) RNA polymerase subunit sigma-54   KO K03092   RNA polymerase sigma-54 factor Organism boh  Bordetella sp. H567 Pathway boh02020   Two-component system boh02040   Flagellar assembly Brite KEGG Orthology (KO) [BR:boh00001]  09130 Environmental Information Processing   09132 Signal transduction    02020 Two-component system     AKI39_00745  09140 Cellular Processes   09142 Cell motility    02040 Flagellar assembly     AKI39_00745  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:boh03021]     AKI39_00745 Transcription machinery [BR:boh03021]  Prokaryotic type   Bacterial type    RNA polymerase     Sigma factors      AKI39_00745 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Sigma54_DBD Sigma54_CBD Sigma54_AID DUF4177 Motif Other DBs NCBI-ProteinID:  AOB29519 LinkDB All DBs Position complement(151456..152895) Genome browser AA seq 479 aa AA seqDB search MQNIVPMTRHALELRPGQHLALTPQLQQSIRMLQLSTLALEAEISQALDENPLLERDEDP AAEDIDSNREESAHEDDPTPEREPAVDEMPGAKGVHADDDSDMPEAARGETLREHLLGQL ALTRAGHRDAALVALLIDELDDNGYLGSPLEEILGWLPAEIETDLDELRAALRLLQSFDP PGIGARDMAECLVLQLREPDLAALPEAAAPAVLACARRVCAEHLPLLAGANAARLREALQ CDDATVRGARALILKLDPRPGRRWTVPVADYAIPDVIVRKARQGWRVVLNSAAMPRLRIN GVYAQMLGNQREASHSALHAQLQQARWMIRNVEQRFDTILRVAQAIVNHQSAFFSQGPSA MRPLILKDIAGELGLHESTISRATTQKYLLTPFGTMELKDFFGAGVATDSGDAASATAVQ AHIKRLVSEENRAKPLSDNQLMLKLAEQGIVIARRTVAKYRESMRIAPASVRKAQAALR NT seq 1440 nt NT seq  +upstreamnt  +downstreamnt atgcaaaatattgtacctatgacgcgtcacgccttagaactccggcccgggcaacacctt gccctgaccccgcagctgcagcagtccatccggatgctgcagctttcgacgcttgcgctg gaggcggaaatctcccaggcgctggacgagaacccgctgctggagcgtgacgaggacccc gccgcggaagacatcgactccaatcgcgaggaatcggcgcatgaagacgatcctacgccg gaacgcgagccggcggtggacgagatgcctggcgccaagggcgtccatgcggacgacgac agcgacatgccggaggccgcccggggcgaaaccctgcgcgaacatctcctgggccagctg gcgctgacgcgcgccggccaccgcgatgcggccctggtcgccctgctgatcgacgaactg gacgacaacggctacctgggatcgccgctggaggaaatcctgggctggctgcccgccgaa atcgagaccgatctcgacgagctgcgggccgcgctgcggctgttgcagtccttcgatccg cccggcatcggcgcgcgcgatatggcggaatgcctggtgctgcaactgcgggaaccggat ctcgccgccttgccggaagcggccgcccccgcggtgctggcctgcgcgcggcgcgtctgc gccgaacatctgccgctattggccggcgccaatgcggcacgcctgcgcgaagccctgcag tgcgacgacgccacggtgcgcggcgcccgtgccctgatcctgaagctggacccccgtccc ggccgccgctggacggtgccggtggccgattacgccatcccggacgtcatcgtgcgcaag gcgcgccagggctggcgcgttgtgctgaacagcgccgccatgccgcgcctgcgcatcaac ggggtgtacgcgcagatgctgggcaaccagcgcgaggccagccattccgccttgcacgcg cagctgcagcaggcccgctggatgatccgcaatgtggaacagcgcttcgataccatcctg cgggtggcgcaggccatcgtgaaccaccaatccgccttcttcagccaggggccctcggcc atgcggcccctgatcctgaaggacatcgccggggaattgggcctgcacgagtccacgatt tcacgggccacgacccagaagtacctgctcactccgttcggcacgatggagctgaaggat ttcttcggcgccggcgtggccaccgatagcggcgacgccgcatcggcgaccgcggtccag gcccacatcaagcggctggtgtcggaagagaaccgcgccaagcccttgtcggataaccag ctcatgctcaaattggccgaacaggggatcgtcatcgcgcggcgcacggtggccaaatac cgggaatcgatgcgcatcgcgccggcctcggttcgcaaggcgcaggcggcgctgcgctag

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