Bordetella sp. H567: AKI39_03540
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Entry
AKI39_03540 CDS
T04979
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
boh
Bordetella sp. H567
Pathway
boh03030
DNA replication
boh03430
Mismatch repair
boh03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
boh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
AKI39_03540
03430 Mismatch repair
AKI39_03540
03440 Homologous recombination
AKI39_03540
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
boh03032
]
AKI39_03540
03400 DNA repair and recombination proteins [BR:
boh03400
]
AKI39_03540
Enzymes [BR:
boh01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
AKI39_03540
DNA replication proteins [BR:
boh03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
AKI39_03540
DNA repair and recombination proteins [BR:
boh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
AKI39_03540
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
RNase_H_2
DNA_pol_A_exo1
Motif
Other DBs
NCBI-ProteinID:
AOB29957
LinkDB
All DBs
Position
792278..793018
Genome browser
AA seq
246 aa
AA seq
DB search
MRQIILDTETTGLEPAQGHRIVEIGCLEIVNRMVTGNTMHVYLNPDRESDPEALAVHGLT
TEFLSDKPRFADVADELVRFLDGAEIIIHNAAFDTKFINAELARIGRSPMHEFCATITDS
LLHARELHPGKRNSLDALCERYGISNAHRTLHGALLDARLLGEVWLAMTRGQDALLIDLD
ESERKGEADGLVLTRFDASELPVIRATAEELGEHEAYLAALDKSVGGACLWRQWDPAPVP
AESQAA
NT seq
741 nt
NT seq
+upstream
nt +downstream
nt
atgcgccagatcatcctcgataccgaaaccacgggccttgaacccgcccaaggccatcgc
atcgtcgaaatcggctgcctggaaatcgtcaaccgcatggtcacgggcaataccatgcac
gtgtacctgaacccagaccgcgaaagcgacccggaagccttggcggtacacggcctgacc
acggaattcctgtccgacaagccgcgattcgcggacgtcgcggacgagctggtgcgtttc
ctggacggcgcggagatcatcatccataacgccgcgttcgatacgaagttcatcaacgcg
gaattggcgcgcatcggccgctcgccgatgcatgagttctgcgccacgatcaccgattcg
ctgctgcacgcccgggaactgcatccgggcaagcgcaattccctggacgcgctgtgcgag
cggtatggcatttccaatgcgcaccggacgctgcacggcgccttgctggacgcgcgcctg
ctgggcgaggtctggctggccatgacgcgcggccaggacgcgctgctgatcgacctcgac
gaatccgaacgcaagggcgaggcggatggcttggtactgacccgcttcgatgcgtcggaa
ctgcctgtcatccgcgccaccgcggaggaattgggcgaacacgaggcctacctggccgca
ctggacaaatccgtcggcggggcgtgcctgtggcggcaatgggatccggcgccggtcccc
gcggaaagtcaggcggcgtaa
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