Bordetella sp. H567: AKI39_04925
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Entry
AKI39_04925 CDS
T04979
Name
(GenBank) ATP-dependent RNA helicase
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
boh
Bordetella sp. H567
Pathway
boh03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
boh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AKI39_04925
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
boh03019
]
AKI39_04925
Enzymes [BR:
boh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
AKI39_04925
Messenger RNA biogenesis [BR:
boh03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
AKI39_04925
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
ERCC3_RAD25_C
Succ_DH_flav_C
AAA_22
Utp25_C
Motif
Other DBs
NCBI-ProteinID:
AOB33419
UniProt:
A0A1B2R8W9
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All DBs
Position
1096750..1098120
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AA seq
456 aa
AA seq
DB search
MVASITETGYTTPTPIQAQAIPVVIAGRDVMGAAQTGTGKTAAFTLPILHRLMPMANSSA
SPARHPVRALILTPTRELADQVAESVKRYSKRTPLRSAVVFGGVDIGPQKESLRNGCEVL
VATPGRLLDHVEQKNVNLGQVGILVLDEADRMLDMGFLPDLERIIRLLPEQRQNLLFSAT
FSNEIRKLARSYLSHPAELEVAARNATADTVTQIAYEMSSEGKRAAVVHLVKSRNLNQVI
VFSNTKIGTARLARELERDGIKAESIHGDKSQADRMKALDAFKAGQLEVLVATDVAARGL
DVAGVPCVINYDLPYNAEDYVHRIGRTGRAGASGEAIALFTPSEERLLLDIEKLIKRPVP
RGKLDVPAELIARSRGHRDESRGSHDRREPRVRSSGDRRYGDSGTRQAPVDDFFLKPYVP
SNPAPESTSGEDAPGERGAAPKRKVAVLLGGTRKPS
NT seq
1371 nt
NT seq
+upstream
nt +downstream
nt
ttggtagcatcgatcaccgaaacgggctacaccacccccactcccatccaggcccaggcg
atccccgtggtgatcgcgggccgcgatgtcatgggcgcggcgcagaccgggaccggcaag
accgcggcgttcacgctgcccatcctgcatcgcctgatgccgatggccaacagcagcgcg
tcgccggcgcggcaccccgtgcgggcgctgatcctgacgcccacgcgcgagctggccgac
caggtcgccgaaagcgtcaagcgctacagcaagcgcacgcccctgcgatcggccgtggtg
ttcggcggtgtggacatcgggccgcagaaggaaagcctgcgcaacggctgcgaggtgctt
gtcgccacgcccggacggctgctggatcacgtcgagcagaagaacgtcaatctgggccag
gtcggcatcctggtcctggacgaagcggaccgcatgctggacatgggcttcctgcccgac
ctggaacgcatcatccggctgcttcccgaacaacgccagaacctgctgttttcggccacg
ttcagcaacgaaatccgcaagctggcgcgctcgtatctcagccaccccgctgaactcgaa
gtcgcggcgcgcaacgcgacggccgacaccgtcacgcagatcgcctacgagatgagcagt
gaaggcaagcgtgccgcggtggtgcacctggtgaagtcgcgcaacctgaaccaggtcatc
gttttttcgaacaccaagatcggcaccgccaggctggcccgtgaattggaacgcgacggc
atcaaggcggaatccatacacggcgataaaagccaggccgatcgcatgaaggcgctggat
gccttcaaggccggacagctggaagtgctggtcgccacggacgtcgccgcgcgcggcctg
gacgtggcgggcgtgccgtgcgtcatcaattacgacctgccgtacaacgccgaggactac
gtgcaccgcatcggccgcacgggtcgcgcgggcgcatcgggcgaagccatcgcgctgttc
acgcccagcgaagaacgcctgttgctggacatcgaaaaactgatcaagcgcccggtgccg
cgtggcaagctggatgtaccggccgaactgatcgcccgcagccgcggccatcgcgacgag
tctcgcggcagccacgatcgccgcgaaccgcgcgtgcgttcgtccggcgaccgccgctac
ggcgactccgggacgcgccaggcgccggtcgacgatttcttcctcaagccctacgtgccg
agcaatcctgcgccggagtccacgtccggcgaggacgcgcccggcgagcgcggtgccgcg
cccaagcgcaaggtcgccgtcctgctgggcggcacccgcaaaccctcctga
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