Bordetella sp. H567: AKI39_05865
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Entry
AKI39_05865 CDS
T04979
Name
(GenBank) poly(A) polymerase
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
boh
Bordetella sp. H567
Pathway
boh03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
boh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AKI39_05865
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
boh03019
]
AKI39_05865
Enzymes [BR:
boh01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
AKI39_05865
Messenger RNA biogenesis [BR:
boh03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
AKI39_05865
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol_arg_C
PolyA_pol
PolyA_pol_RNAbd
Gad2
Motif
Other DBs
NCBI-ProteinID:
AOB30318
LinkDB
All DBs
Position
complement(1296362..1297735)
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AA seq
457 aa
AA seq
DB search
MITETIKKFVARLFPARGPLRIPQERHGIDRRNVSRHAIKVCEVLRQAGYEAYLVGGAVR
DLIVGIEPKDFDIATNATPEQIRPLFRRARIIGRRFQLVHVVFGQEIIETSTFRALATED
TETDEHGRILRDNVFGSQEEDAARRDFTMNALYYDPLTEIVIDYHNGVADLKKRMVRMIG
DPAKRYREDPVRMLRAVRFAAKLNGAIDDDTRAPIQSMASLIENVPASRLFDEMLKLLTC
GHAMDCLRQLRAVGLHHGVLPLLDVVLEQPQGEQFVELALERTDARVRAGKTISPSFLFA
ALLWQQVEVRWRDLCKQGELPIPALLQAADSVLDEQTEKLAIQRRFSADMREIWFMQPRF
ERRMGKTIYRMLEQPRFRAACDFLQLRAAAGEFDSVLAQWWMDLANADDATRAQMIDEAA
RAPRAKGDDAAAPRRRRSRRRSSGGGGQAVVAHGHDE
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
atgatcacggaaaccataaaaaaattcgtcgcccggctattcccggcacgcgggccgcta
cgcatcccgcaagagcgccacggcatcgaccgccgcaacgtatcgcggcatgccatcaag
gtctgtgaagtcctgcgccaggcgggctacgaggcctatctcgtcgggggcgcggtgcgc
gacctgatcgtcggcatcgaacccaaggatttcgacatcgcgaccaacgccacgccggag
cagatacgcccgctgttccggcgcgcccgcatcatcggccgccgtttccagctggtccac
gtggtcttcggccaggaaatcatcgaaacgtcgactttccgcgccttggccacggaagac
acggaaaccgacgaacacggccgcatcctgcgcgacaacgtcttcggcagccaggaagaa
gacgcggcgcgccgcgatttcaccatgaacgcgctgtactacgacccgctgacggaaatc
gtcatcgattaccacaacggcgtcgccgacttgaaaaagcgcatggtgcgcatgatcggc
gatccggccaagcgctatcgcgaagacccggtgcgcatgctgcgcgcggtgcgcttcgcg
gccaagctgaacggtgccatcgacgacgacacgcgcgcgcccatccagtccatggccagc
ctgatcgaaaacgtaccggcctcgcgcctgttcgacgaaatgctcaagctgctgacctgt
ggccacgccatggattgcctgcggcagttgcgggccgtgggcctgcatcacggggtgctg
cccctgctcgacgtggtgctggaacagccgcagggcgagcagttcgtcgaactggcgctg
gaacgcaccgacgcccgcgtgcgcgccggcaagaccatcagccccagcttcctctttgcc
gcgctgttgtggcagcaggtggaagtccgttggcgcgacctgtgcaagcagggcgagctg
ccgatacccgcgctgctgcaggcggccgattcggtgctggacgaacaaaccgaaaaactg
gccatccagcgccgtttttccgccgatatgcgcgaaatctggttcatgcagccgcgcttc
gagcgccgcatgggcaagaccatctatcgcatgctggagcagcctcgcttccgtgccgcc
tgtgacttcctgcagctgcgcgccgcggccggggaattcgacagcgtgctggcgcaatgg
tggatggacctggccaatgccgacgacgccacgcgcgcccagatgatcgacgaggccgcg
cgcgcgccgcgcgccaagggcgatgacgcggcggcgccgcgccgccggcgttcgcgccgc
cgcagcagcggtggtggcggccaggccgtggtggcgcacggccacgacgagtaa
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