Bordetella sp. H567: AKI39_05965
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Entry
AKI39_05965 CDS
T04979
Name
(GenBank) DNA polymerase III subunit gamma/tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
boh
Bordetella sp. H567
Pathway
boh03030
DNA replication
boh03430
Mismatch repair
boh03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
boh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
AKI39_05965
03430 Mismatch repair
AKI39_05965
03440 Homologous recombination
AKI39_05965
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
boh03032
]
AKI39_05965
03400 DNA repair and recombination proteins [BR:
boh03400
]
AKI39_05965
Enzymes [BR:
boh01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
AKI39_05965
DNA replication proteins [BR:
boh03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
AKI39_05965
DNA repair and recombination proteins [BR:
boh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
AKI39_05965
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNAX_ATPase_lid
DNA_pol3_gamma3
AAA
RuvB_N
DNA_pol3_tau_5
AAA_16
AAA_22
AAA_14
AAA_18
AAA_2
TsaE
AAA_5
nSTAND3
DUF3646
RsgA_GTPase
AAA_19
Rad17
AAA_28
Motif
Other DBs
NCBI-ProteinID:
AOB30335
LinkDB
All DBs
Position
1317663..1320080
Genome browser
AA seq
805 aa
AA seq
DB search
MTYLVLARKWRPRSFDTLVGQDHVVRALTHALDAQRLHHAWLFTGTRGVGKTTLSRILAK
SLNCETGVTSKPCGVCQACTEIDAGRFVDYLELDAASNRGVDEMTQLLEQAVYSPGAGRF
KVYMIDEVHMLTGHAFNAMLKTLEEPPPHVKFILATTDPQKIPVTVLSRCLQFNLKQMPP
DAIVGHLRQVLGDEQLAFEVPALRLIAQAASGSMRDALSLTDQAIAYSAGNLTEEAVRGM
LGTIDQRHLVRLLDALGVGDAPAVLAVADELATRGLSYGGALADLAGLLSRVAIEQRVAG
AISSDDPLAGDIARLARSLHPDAVQLFYSVAVHSRGELALAPDEYAGFVMACLRMLSLSG
EAGPQAMPAMPPATSAEAPAGAAATAAATSTVSTASSASTASTASNASTAPPAATTAPAA
IAPVASTPATSTAPAAPALAATPADTAAPAAIAPSTAASAASTPSTAASAAPASSTTTAA
SSMPPTPAAGPSGPGSEPATPAPVSAPVVAEAAPGVPARTSTPGTSSPGAAALAVTPPAA
STTPAPVPAAGIAPWDDAADAKPGKRDARDTAAPERPREARAAPAATNGVAATPKDDGGP
PAWVDEIIPDDAEGGYVSSGPDDGGFIASPDDDDDFETMASPGDRVPTAPAAAPVRRAPA
SGGKSRQRPRLADMSEANWPELAARLPVTGLAAELARQSEWHGVQGDTVMLRVAVRTLAD
SASRVRLQTVLCEHFGQSLRLDVLVGATGEATAHAVAQQERAERQRAAEAAVQADPFVRS
LLSDFGGQVVPGSIRHVDSPPAAPR
NT seq
2418 nt
NT seq
+upstream
nt +downstream
nt
atgacctatctcgtattggcccgcaagtggcggccccgctcgttcgataccctggtcggg
caggatcatgtggtgcgcgccctcacgcatgcgctggatgcccagcggctgcatcacgcc
tggctgttcaccggtacgcgtggggtgggcaagacgacgctgtcgcgcatcctggccaag
tcgctcaattgcgaaacgggcgtcacttccaagccctgtggcgtctgccaggcctgcacg
gaaatcgatgccggccgcttcgtcgattacctggaactggacgcggcctccaatcgcggc
gtcgacgaaatgacgcagctgctggaacaggcggtctattcgccgggggcagggcgcttc
aaggtctacatgatcgacgaagtccacatgctgaccggccacgccttcaacgccatgttg
aagacgctggaagagccgccgccgcacgtcaagttcatcctggcgaccaccgatccgcag
aaaattccggtcacggtgttgtcgcgctgcctgcagttcaacctgaagcagatgccgccc
gatgccatcgtcggccacctgcgccaggtgctgggcgatgagcaattggccttcgaggtg
ccggcgctgcgcctgatcgcgcaagccgcctcgggttccatgcgcgacgcgctgtcgctg
accgaccaggccatcgcgtacagcgcgggcaacctgactgaagaagccgtgcgcggcatg
ctgggcaccatcgatcagcgccacctggtgcgcctgctcgatgcccttggcgtcggcgat
gcgccggccgtgctggccgtcgccgatgagctcgcgacgcgcgggctgtcgtatggcggc
gcgctggcggacctggcgggcctgctgtcgcgggtggccatcgaacagcgcgttgcgggc
gcgatttcctcggacgatccgctggcgggggatatcgcgcgcctggcgcgcagcctgcat
cccgatgcggtgcagcttttctattccgttgccgtgcacagccgcggcgaactcgcgctg
gcgccggacgaatatgcgggcttcgtgatggcctgcctgcgcatgctgtcgctgagcggt
gaggccgggccgcaggccatgcccgccatgccgccggccacgagcgcggaggcgccggcg
ggcgccgctgcaacggccgccgcgacatcgacggtatccacggcttcctcggcgtccacg
gcatccacggcatcgaacgcatccacggcgcccccggctgcaacgacggcgcctgccgcc
attgcacctgttgcctctacacctgccaccagcaccgcacctgctgctccagctttggcc
gccacacccgcggacacggcggctccggccgcaatcgcgccatcaaccgccgcttcggcc
gcaagcacgccgtcaacggcggcttcggctgcgcccgcttcgtctacgactaccgctgct
tcgtccatgccgcccacgccggcggccgggccatccggcccggggagcgagcccgccacg
ccggcacccgtctccgcgcccgtggtggccgaggccgcgcccggcgtgccggcgcgtacg
tcgacgccaggaacgtcttcgcccggcgccgcggctctggcggtgacgccgccggccgcc
tcgactacgccggcccctgttccggcagccggtatcgcaccctgggatgacgcggctgat
gcaaagcccggcaagcgggacgcccgcgataccgccgcgcctgaacgtcctcgcgaagcc
cgcgctgcccctgccgccacgaacggtgtcgcggcgacgccgaaagacgacggcgggccg
ccggcgtgggttgatgaaatcatccccgacgacgcggagggcggctatgtatcgtccggc
cccgacgacggcggcttcatcgccagcccggacgacgacgatgacttcgagaccatggcc
agtcccggcgaccgtgtcccgacagcgcccgccgccgcgccggtgcgccgtgcgcccgcg
tccggcggcaagtcccgccagcggccccgcctggccgatatgtcggaggcgaactggccg
gaactggccgcgcgcctgcccgtgaccgggcttgccgccgaactggcccgccagagcgaa
tggcatggcgtgcagggcgacaccgtcatgctgcgcgtggccgtccgcaccctggccgac
agcgccagccgggtgcgtctgcagaccgtgctgtgtgagcatttcgggcaaagcctgcgg
ctggatgtcctggtgggcgccacgggcgaggccaccgcgcatgccgtggcgcagcaggaa
cgcgccgaacgccagcgcgccgcggaggccgcggtccaggccgatcccttcgtgcgctcg
ctattgtcggatttcggtggccaggtggtgcccggctctatccgccacgtggattcgccg
ccggcggcgccgcgttga
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