Bordetella sp. H567: AKI39_06555
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Entry
AKI39_06555 CDS
T04979
Name
(GenBank) hypothetical protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
boh
Bordetella sp. H567
Pathway
boh03420
Nucleotide excision repair
boh03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
boh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
AKI39_06555
03430 Mismatch repair
AKI39_06555
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
boh03400
]
AKI39_06555
Enzymes [BR:
boh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
AKI39_06555
DNA repair and recombination proteins [BR:
boh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
AKI39_06555
MMR (mismatch excision repair)
Other MMR factors
AKI39_06555
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD_C
DUF5710
UvrD-helicase
AAA_19
UvrD_C_2
Viral_helicase1
Big_3_4
AAA_30
Motif
Other DBs
NCBI-ProteinID:
AOB30432
UniProt:
A0A1B2R0F4
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All DBs
Position
1445746..1447875
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AA seq
709 aa
AA seq
DB search
MNRAAAPLFIPSRFVPTREQCDIQLSHDRLTLIEANAGAAKTTTLALRIGEALVRGLPPE
RILALTFTPEARDVMRSRLADVGISAGISARICVRTIDDFAHEVLAKIEDAVPPKRVSSR
HLRDAALEALTNVSARYEHLDDLLDIRTHNIAVSQFLDALLRLKAMMAFDHVDNALGLES
AAEDLGVTLTTYLWAREYEELRCGLFDEIQFRGPLDATYDLAKMLRADPAVPELLPDFGL
ITADELHDLNEASFTILEALSRRTDAYFVGAGDRDQVIHTQSGADAQFLTRRFSYAARYP
LTMTYRHGPHLAYAMREFKNKPIESALSLPADIEVLTYSDAQPHECADRIIQAVRAWQST
GKSLDGCAILLRERHQSVEIENVLMRANIGYRTGSMQSYLLREEILFLRGMLAIALDDLD
AVRSESIRGAIIEALAVFGEVPLTAKEIEEAKQTITRYPDMLRDFFVGQITRAGNQVVSG
RIAAAVQLVRSSVPETPAYETLHAVCDVLDIEVLARRIYVDPHEAAIIAHSIDGFIAMAQ
RSAMSLREFYNWLGAADAFVSTRRSKNLVLLEYAAHSKGKEFDHVLIPFLEDGEFPSSIY
ALRDEENLFYVAATRARFRLTLIAPSRQERRSPFIARMRLSETGSYANAVLRREPPRPTV
SPARQDLSVPFADKDVAKALGARWDSVRKVWYLLPDQDPGPFAPWLPER
NT seq
2130 nt
NT seq
+upstream
nt +downstream
nt
atgaaccgagctgcggcaccattgtttattccttctcgcttcgtaccgacccgtgagcag
tgcgatattcaactgtcacatgatcgactaacgctcatagaagccaatgctggagcggcg
aagaccaccacgttggcgcttcgcataggagaagcgctcgtgcgagggctccccccagag
agaatcctggcccttacatttacacccgaggcccgggacgtcatgcggtcgagattggca
gatgtcggtatttctgccggcatatccgcgcggatatgtgtgcgaaccatagatgatttc
gcacacgaagtgctggcgaaaattgaggatgcggtaccgccgaaacgggtttccagtcga
catttgcgggacgcggcgctggaggcgctgacgaacgtcagcgccaggtacgaacacctt
gatgacctgcttgatatacgaacgcataacatcgccgtgagtcagttcctggatgcgctg
ctgcggctgaaggctatgatggctttcgatcatgtcgacaacgccctcggccttgaatcc
gccgcggaggatttaggcgttacgctgactacttatctatgggcgcgggaatacgaggaa
ctgcggtgcggcctttttgatgagattcagtttcgcgggccgcttgacgccacgtacgac
ttggcgaaaatgcttcgcgccgacccggcggtaccggaactgctgcccgactttggcctc
ataacggcagatgaactacatgacctgaacgaggcttccttcactattctggaagcgttg
tctcgaaggactgacgcgtattttgtcggggcaggcgatcgcgaccaggttattcatacg
caaagcggcgctgatgcacagttcctgaccaggcgtttttcatatgccgcccgctaccct
ttaaccatgacctatcgtcatgggccccaccttgcgtacgcaatgcgggagttcaagaac
aagcccatcgagtctgcgctatctttgcccgccgatatagaggtgctgacctattctgat
gcgcagccgcatgagtgtgcggatcgaataatacaggccgtacgggcatggcagtccaca
gggaaatcgttggacggttgcgcgattttattgcgggaaaggcaccagtcggtggagatc
gagaatgtgcttatgcgggccaatattggctatcgtaccggcagcatgcagagctatctt
ctccgcgaagaaatcttgttccttcgtgggatgcttgctattgcattggacgacctggat
gcggtgcgttccgaatccattcgaggtgccatcatcgaggcgctggcggtttttggagag
gtgccgctgacggcaaaagagatagaagaggccaaacaaaccataacgcggtaccccgac
atgctgcgcgacttctttgtcgggcaaatcacgcgagcgggcaaccaggttgtgagtggg
cgcatcgccgccgctgtgcaattggtgcgctcctctgtgccggagacgccagcatatgaa
acgctccatgccgtttgcgacgtgttggatatagaggtccttgcgcgtcgcatttatgtc
gatccgcacgaggcggcgatcattgcccattccattgacggcttcattgccatggcacag
cggtctgcaatgagcttgcgggagttttacaattggttgggcgctgctgatgcttttgtc
tctacgcgccggagtaaaaatctggtcctgctcgaatacgcggctcattccaagggcaag
gagttcgaccacgttttgatcccctttctggaggatggggaattcccgagttcgatatac
gctctacgtgacgaggaaaaccttttttatgtggcggctactcgggcacgctttcggctg
acgttgattgcaccctctcggcaagagcgtcgtagccccttcatagcgagaatgcggtta
agcgaaaccggttcgtatgcgaatgccgttttacggcgagagccgccgcggccgactgta
tccccggcacggcaggatctgtctgttccattcgcggacaaggacgtggccaaggccctc
ggcgcaagatgggattcagtgcgcaaagtatggtatctgcttccggatcaagaccccgga
ccgttcgcgccttggttgccagagcgctaa
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