Bordetella sp. H567: AKI39_15475
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Entry
AKI39_15475 CDS
T04979
Name
(GenBank) DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
boh
Bordetella sp. H567
Pathway
boh03420
Nucleotide excision repair
boh03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
boh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
AKI39_15475
03430 Mismatch repair
AKI39_15475
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
boh03400
]
AKI39_15475
Enzymes [BR:
boh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
AKI39_15475
DNA repair and recombination proteins [BR:
boh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
AKI39_15475
MMR (mismatch excision repair)
Other MMR factors
AKI39_15475
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
AAA_30
AAA_12
Viral_helicase1
AAA_22
Motif
Other DBs
NCBI-ProteinID:
AOB31803
UniProt:
A0A1B2R484
LinkDB
All DBs
Position
complement(3451857..3454142)
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AA seq
761 aa
AA seq
DB search
MIDKLNPEQRAAVTLEPQHALVLAGAGSGKTRVLTTRMAWLIQNGLASPYALLAVTFTNK
AAREMLARISAILPIDTRGLWVGTFHGLCNRLLRAHHRDAGLPQAFQILDTADQLAAIKR
LLKANGIDDEKYPPRDVQRFINSAKEEGERPGDLEAWDSHRRRLIEIYQLYEAQCQREGV
VDFPELLLRAYELLSRNAPVREHYQRRFRHILVDEFQDTNTLQYKWLRLLAGGGAYIFAV
GDDDQSIYAFRGANVGNMADFERDYARGTVIRLEQNYRSYGHILDSANALIDHNSGRLGK
NLWTEQGEGEPVRVVEQPSDGMEAQWVVDEIRALVNEGRLRREIAVLYRSNAQSRVLEHA
LFSAGIPYKVYGGLRFFERQEVKHALAYLRLISNPHDDTSWMRVVNFPARGIGARTLEQL
ADAARAHDTSLYGAVARVAGKGGSNLAQFATLIGRMADETRELPLPEMVEHVLEASGLIE
HYRGEKEGTERIENLNELVTAAAVFSSEEHFDGLPAGVPAQREATPDATLDAGFNAVAEN
LTPLAAFLSHAALEAGDNQAQAGQDAVQMMTVHAAKGLEFDAVFITGLEEGLFPHENSVL
EQAGLEEERRLMYVAITRARERLYLSLAQSRMLHGQTRYAMRSRFLAEIPEQHLKWLTPR
AGATDDHVRGGAPWGGAARDAFGRKPVGAIAPRQPRGVTSGVTVGDRQYRIGQGVRHARF
GDGTIIGLSGSGQDAQAQIQFRDVGAKTLALGIAKLDVIAG
NT seq
2286 nt
NT seq
+upstream
nt +downstream
nt
atgatcgacaagttaaatcccgaacaacgcgccgccgtcacgctggaaccgcagcacgcc
ctggtcctggccggggcgggtagcggcaagacgcgcgtactgaccacacgcatggcatgg
ctgatccagaatggtctggccagcccttatgcgctcctggcagtcacttttaccaacaag
gctgcgcgcgagatgctcgcgcgcatctcggcgatcctgcccatcgatacgcgcggcctg
tgggtgggcaccttccatggcctctgcaatcggctgttgagggcgcaccaccgtgatgcc
gggctgccgcaggccttccagatcctcgataccgcagaccagctggcggccatcaagcgg
ctgctcaaggccaacggcatcgatgacgaaaaatatccgccgcgtgacgtccagcgcttc
atcaacagcgccaaggaagaaggcgaacgcccgggcgacctggaagcctgggatagccac
cgccgccggctgatcgaaatctaccagttgtatgaagcgcaatgccagcgggaaggggtg
gtcgactttcccgaactgctgctgcgcgcctacgaactgctgtcgcgcaacgcgccggtg
cgcgagcattaccagcgccgcttccgccacatactcgtcgacgagttccaggacaccaac
acgctgcagtacaagtggctgcggttgcttgcgggcggcggcgcctacattttcgcggtg
ggtgacgacgaccagtccatttatgcgtttcgtggcgcgaacgtcggcaacatggccgat
ttcgaacgcgactatgcgcgcggcaccgtcattcgcctggaacagaactaccgctcctac
ggccacatcctggattccgccaatgccttgatcgaccataacagtggtcgcctgggcaag
aacctatggacggagcaaggcgaaggcgagcccgtccgagtcgtcgagcagccctccgac
ggcatggaggcgcagtgggtggtggacgagatccgcgccctggtcaatgaagggcggctg
cgccgcgagatcgcggtgctctaccgcagcaacgcccagtcgcgcgtgctcgaacatgcg
ctgttctcggcgggcataccctataaagtctatgggggcctgcgctttttcgaacggcag
gaagtcaagcacgcgctggcctatctgcggctgatcagcaatccgcacgacgatacgtct
tggatgcgcgtggtgaactttcccgcgcggggtatcggcgcgcgcacgctggaacagctg
gcggacgcggcgcgcgcccatgacaccagcctgtatggcgcggtggcgcgcgtggcggga
aagggcggctcgaacctggcccagttcgccaccttgatcggccgcatggccgatgaaacg
cgggaactgcccctgcctgaaatggtcgagcacgtgctggaggccagcggcctcatcgaa
cattaccggggcgaaaaagaaggtaccgagcgcatcgaaaacctgaacgaactggtcacc
gccgccgcggtgttctccagcgaggaacacttcgacggcctgcccgcgggtgtgcccgcg
cagcgggaggctaccccggacgccacgctggacgcggggttcaacgccgttgcggaaaac
ctgacgccgctcgctgcgttcctgtcgcacgccgcgctggaagcgggcgacaaccaggcg
caggcggggcaggacgccgtgcagatgatgaccgtccatgccgccaaggggctggagttc
gatgccgtctttatcaccggtctggaagaaggcttgttcccgcacgaaaacagcgtgctg
gaacaagcgggcctggaagaagaacggcgcctgatgtatgtcgcgatcacgcgcgcacgc
gagcgcctgtacctcagcctggcgcaaagccgcatgctgcatgggcaaacgcgctatgcc
atgcggtcgcgcttcctggcggaaatccccgaacagcatctgaaatggctgacgccccgg
gcgggcgccaccgatgaccatgtgcgtggcggcgccccctggggcggtgccgcgcgcgat
gcgttcggacgcaagcccgtgggggccattgccccgcgccagccccgtggtgtgacgtcg
ggtgtgaccgtgggcgatcgtcagtaccgcatcgggcaaggtgtccgccatgcccgtttc
ggcgacggcaccatcataggcctgagtggaagcggacaggatgcgcaggcccagatacag
ttccgcgatgtgggcgccaagacgctggcgctgggcatcgctaagctggacgtcatcgcg
ggctga
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