KEGG   Bordetella sp. H567: AKI39_15795
Entry
AKI39_15795       CDS       T04979                                 
Name
(GenBank) DNA-binding protein HU
  KO
K03530  DNA-binding protein HU-beta
Organism
boh  Bordetella sp. H567
Brite
KEGG Orthology (KO) [BR:boh00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:boh03032]
    AKI39_15795
   03036 Chromosome and associated proteins [BR:boh03036]
    AKI39_15795
   03400 DNA repair and recombination proteins [BR:boh03400]
    AKI39_15795
DNA replication proteins [BR:boh03032]
 Prokaryotic type
  DNA Replication Initiation Factors
   Initiation factors (bacterial)
    AKI39_15795
Chromosome and associated proteins [BR:boh03036]
 Prokaryotic type
  Nucleoid associated proteins
   HU (heat unstable protein)
    AKI39_15795
DNA repair and recombination proteins [BR:boh03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Supressor
      AKI39_15795
SSDB
Motif
Pfam: Bac_DNA_binding HU-HIG HU-CCDC81_bac_2 HU-CCDC81_euk_1
Other DBs
NCBI-ProteinID: AOB31854
UniProt: A0A1B2R4F9
LinkDB
Position
complement(3527181..3527453)
AA seq 90 aa
MNKTELIDHIASKADISKAAAGRSLDALIGAVKSTLKKGGTVTLVGFGTFAVSSRAARTG
RNPRTGESIKIKKAKVPKFRAGKALKDAVN
NT seq 273 nt   +upstreamnt  +downstreamnt
atgaacaaaactgaactcatcgaccacatcgccagcaaagcggatatctcgaaggcggcc
gcgggccgttccctcgacgcgttgatcggcgccgtgaagtcgacgctgaagaagggcggc
accgtaaccctggtcggtttcggcacgttcgccgtgtcttcccgtgcagcacgtaccggt
cgcaatccccgcaccggtgaaagcatcaaaatcaaaaaagccaaggtgcccaagttccgc
gccggcaaggccctgaaggacgcagtcaactga

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