Bordetella sp. H567: AKI39_19175
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Entry
AKI39_19175 CDS
T04979
Name
(GenBank) pectate lyase
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
boh
Bordetella sp. H567
Pathway
boh00040
Pentose and glucuronate interconversions
boh01100
Metabolic pathways
boh02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
boh00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
AKI39_19175
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
AKI39_19175
Enzymes [BR:
boh01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
AKI39_19175
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Motif
Pfam:
Pectate_lyase_4
Motif
Other DBs
NCBI-ProteinID:
AOB32391
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Position
complement(4268036..4269223)
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AA seq
395 aa
AA seq
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MMRWLLALAVVYGGVAAASDSCNIADEHCPSVSSLLQQREGYGAKATGGLGGRFVEVTSD
KDAGPGTLRAALKHAQGPTWIRFASDMTIVLASQIRVPSNITIDGRGKHITLIDDGLGIY
GSRNVILTHLTIDGRFSRLTQAVNVANGSQDVWVDHLDLSRFSDRLLNVKNGSTDVTVSW
TKFHDSDKVMLLNNITSKNLFQNYGRDSIARVTLHHNYFLNTVQRNPRAQFGTFHLFNNL
LENWDFYGMSFSLEARALVEGNMFSNVSQRKCVEPEFFPTVEGINVNYCRYIQDAPKKSA
LDNGDSDRRNYEKSKGQYGYKQEFKAFLRLKDNLYLGDAKPVLQDYRPEQVPAPPYCYGY
QHPTPDLAETIRRQAGNTLGEFPAVARHSGSGCPS
NT seq
1188 nt
NT seq
+upstream
nt +downstream
nt
atgatgcgctggcttcttgccctggcggtggtgtatggcggcgtggccgccgcgagcgat
tcctgcaatatcgcggacgagcattgtccgagtgtctcgtcactcctgcaacaacgcgaa
ggctacggcgcaaaggccacgggcggcctcggcggtcggttcgtcgaggtcacatccgac
aaggacgcggggccgggaacattgcgcgcggcgctcaagcatgcccaagggcccacgtgg
atccgctttgcgtccgacatgaccatcgtgctggcgtcgcagatccgcgtgccatcgaac
atcacgatcgatggacggggcaagcacatcaccttgatcgacgatgggttggggatatac
ggcagcaggaacgtcatcctcacgcatctgacgatagacgggcgattcagccggctcacc
caggccgtgaatgtggccaatggcagtcaggatgtctgggtggaccatctcgatctgtcg
cgattctctgatcggctgctcaatgtgaagaacggttcgaccgacgtcacggtttcgtgg
acgaaatttcatgattccgacaaggtcatgttgctcaacaacataacgtcgaaaaacctt
ttccagaactacggccgggattccatcgcgcgggtgaccctgcaccacaactatttcctg
aatacggtgcaacgcaatccaagggcgcaattcgggacgttccacctgttcaacaacctc
ttggagaactgggatttctacggcatgagtttcagcctggaggcgcgtgcgctggtcgaa
ggaaacatgttcagcaacgtatcgcagcgcaagtgtgtggagcccgagttctttccgacg
gtcgagggcatcaacgtgaactactgccgctatatccaggatgcccccaagaaaagcgcg
ctggacaacggcgattccgatcgtcgcaactacgagaaatcaaagggtcagtatggctac
aagcaggagttcaaggcatttttgcgcttgaaggacaatctttacctgggcgacgcgaaa
cccgtgctgcaggactaccgtcccgagcaggtgccggcccctccgtactgctacggttat
cagcatccgacgccggatctggcggaaacaatccgcaggcaggcgggcaatacgctcggg
gaattcccggccgtcgcccggcacagcggatcggggtgtccctcgtaa
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