Bordetella sp. H567: AKI39_23310
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Entry
AKI39_23310 CDS
T04979
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
boh
Bordetella sp. H567
Pathway
boh03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
boh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
AKI39_23310
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
boh03400
]
AKI39_23310
Enzymes [BR:
boh01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
AKI39_23310
DNA repair and recombination proteins [BR:
boh03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
AKI39_23310
Prokaryotic type
AKI39_23310
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
AOB33051
UniProt:
A0A1B2R7U1
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All DBs
Position
5207936..5208688
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AA seq
250 aa
AA seq
DB search
MENRLRTPLSVLASQLPPEWAPALATPAAARALPEICGHVDRRVEAGITVYPCAPFRVLE
LLRPRDVKVVILGQDPYHGPGQAQGLAFSVPDGCKRPPSLRNIFKEIAAEYPDKGIPAGN
DLTPWVEQGVLLLNTSLTVEDGQPASHAKRGWEAITDALISLVARQPQPKVFMLWGAHAQ
SKRALLPQDHNTLVLMANHPSPLSASRPPAPFLGCGHFRQANEWLLTRGQEIVDWGLPQK
TLAPQLQFGL
NT seq
753 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaccgtctccgtacccccttgtccgtattggcttcccaactgccgccggagtgg
gcgcctgccctggccacccccgccgccgcgcgggcattgccggaaatctgcggccacgtc
gaccgccgggtcgaggctggcatcaccgtctatccctgcgcgcccttccgggtgctggag
ctgctacggccgcgcgacgtcaaggtggtgatcctgggccaggacccctatcacggcccc
ggccaggcccagggactggcgttttccgtcccggacggctgcaagcggccgcccagcctg
cgcaatatcttcaaggaaatcgccgcggagtacccggacaagggcataccggcgggcaac
gacctcacgccctgggtagagcaaggcgtgctgctgctgaatacctcgctcacggtagag
gacggacagcccgcctcgcacgccaagcgcggctgggaggccatcaccgacgccctgatt
tcgctggtggcccgccagccacagcccaaggtgttcatgctgtggggcgcgcacgcccag
tccaagcgcgcactgttgccacaggaccacaacacgctggtgctgatggccaaccatccg
tcgcccctgtccgcatcgcgtccacccgcgccgttcctgggctgcggccatttccgccag
gccaatgagtggcttctgacgcgcggacaggaaattgtcgattggggtttgccccagaaa
acgctggcgccgcagcttcagttcgggttatga
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