Bordetella sp. H567: AKI39_24245
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Entry
AKI39_24245 CDS
T04979
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
boh
Bordetella sp. H567
Pathway
boh00300
Lysine biosynthesis
boh00470
D-Amino acid metabolism
boh01100
Metabolic pathways
boh01110
Biosynthesis of secondary metabolites
boh01120
Microbial metabolism in diverse environments
boh01230
Biosynthesis of amino acids
Module
boh_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
boh00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
AKI39_24245
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
AKI39_24245
Enzymes [BR:
boh01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
AKI39_24245
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GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
AOB33195
UniProt:
A0A1B2R8N4
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All DBs
Position
5428108..5429400
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AA seq
430 aa
AA seq
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MNALTPAPAQPAGYPHFHYRHGVLHAEGVPLPMLAERLGTPLYVYSRAALQAAWESYREA
IAGRDVLVCYGMKANSNLAVLKEFARLGAGFDIVSGGELHRVLSVGADPAKVVFSGVGKQ
AWEMRKALEADVKCFNVESEAELHLLSDVAVSLGKTARVSLRVNPDVDAGTHPYISTGLK
ENKFGIAIADAPQVYRTAAALPGVAVTGVDCHIGSQITDVSPYLDALDKLLDLIDGLRAA
GIEIEHLDLGGGLGIRYTDETPLRPATLLGQVYERLDARGLGRLKLIMEPGRSLVGNAGV
LLTTVQFLKHAEARNFAIVDAAMNDLIRPTLYDAWHGVLPVQPRGGATQEYDVVGPVCES
GDWLAKQRALAVERGDVLAIESTGAYGMVMSSNYNTRPRPAEVMVDGAAFHVIRQRETVE
DLLRGESTLP
NT seq
1293 nt
NT seq
+upstream
nt +downstream
nt
atgaacgcacttacccccgcgccggcgcaacccgccggctatccccatttccactatcgg
cacggcgtgctgcacgcggaaggcgtgccgctgcccatgctggccgaacgcctcggcacg
ccgctctacgtctattcgcgagccgcgctgcaggccgcctgggaatcctaccgcgaggcc
atcgccgggcgcgacgtcctggtgtgctacggcatgaaggcgaattccaacctggcggtg
ctgaaggagttcgcccgcctgggggcgggtttcgacatcgtgtcgggtggtgaactgcac
cgcgtgctatcggtgggcgcggatccggccaaggtcgtgttttccggcgtcggcaagcag
gcctgggagatgcgcaaggcgctggaggcggacgtcaagtgcttcaacgtcgaatccgaa
gccgaactgcatctgctgtcggacgtcgcggtttcgctgggcaagacggcccgcgtgtcg
ctgcgcgtgaatcccgacgtggatgccggcacgcatccctatatttcgacggggctgaag
gaaaacaaattcggcatcgccatcgccgacgcgccgcaggtctaccggacggccgccgcg
ctgccgggcgtagcggtcaccggcgtagactgccacatcggctcccagatcaccgacgtt
tcgccctacctggacgccctggacaagctgctggacctgatcgacggcctgcgcgccgcc
ggcatcgagatcgaacacctggacctgggtggcggcctgggcatccgctataccgacgaa
accccgctgcgccccgccacgctgctcggccaggtctatgaacgcctggacgcccgcggg
ctgggccgcctgaagctgatcatggaaccgggccgttccctggtgggcaatgccggtgtc
ctgctgaccaccgtgcaattcctgaagcacgccgaagcccgcaatttcgccatcgtggac
gcggccatgaacgacctgattcgccccacgctgtacgacgcctggcacggcgtgctgccg
gtacagccgcgcggcggcgccacgcaggaatacgacgtcgtcggcccggtgtgcgaaagc
ggcgactggctggccaagcagcgcgccttggcggtggagcgcggcgacgtgcttgccatc
gaatccacgggcgcctatggcatggtcatgtccagcaactacaacacccgtccgcgcccc
gccgaagtcatggtcgacggcgcggcattccacgtgatccgccagcgcgaaaccgtggaa
gacctgctgcgcggggaaagcacgctgccctga
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