KEGG   Bordetella sp. H567: AKI39_24495
Entry
AKI39_24495       CDS       T04979                                 
Name
(GenBank) type VI secretion protein Vgr
  KO
K11904  type VI secretion system secreted protein VgrG
Organism
boh  Bordetella sp. H567
Pathway
boh03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:boh00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    AKI39_24495
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:boh02044]
    AKI39_24495
Secretion system [BR:boh02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   AKI39_24495
SSDB
Motif
Pfam: Phage_GPD Gp5_trimer_C Phage_base_V DUF2345 Sarcoglycan_1 DUF6484 Gp5_C FapA Gp44-like_2nd
Other DBs
NCBI-ProteinID: AOB33239
LinkDB
Position
complement(5469126..5471495)
AA seq 789 aa
MQRIVTAHTPLGPDTLLFRAMNGSEGVSMLFEFEVELLSESYALDLRELLGKPLSLEIAA
AGGAPRYLSGHITRCTLVGRENATSRLYIYRATVRPWLWYLTQTSDNKIFQNKSAPDIIR
EVLADYPFPVEWRLSGTYRNWEYGVQYQETDFDFISRLMEHEGIYYWFRHEQDRHTLVLT
DDIAQHDSCPGCETLPYYGPDRVAVPREEYVNAWEPAEQITPSGFATTDFDFRHPGTSMD
ARRANPGPYDDGKLEIYEWLGGYTDPDQGEHYTRVRLEGLQCRRELVSGACNAQGFAPGY
RFSLTNHPRGAENREYLIVAAHYHIREGGYASGTPDPMAFDVGFTALPSSVQFRPPRVTP
PAYTHGPQTATVVGKDGQQIWTDEYGRIKVQFHWDRVGQRNENSSCWVRVSSPWASGGFG
GIQLPRRGDEVVVDFIGGHPDRPIVIGRVYNGANMPPWELPSNATQSGFLSRTQDGTPRT
ANALMFEDKPGQEEIWLHAERNMRTEVEADEHRSVDGSRTTTIGGDDTTTIAGTRTIHVQ
GADALTVGQARSVTVTDNETYTVNGARALHVSGGMATESFDQGLTTTVSADGETRTVTGP
FKETLNTGQEVHVSAGNALHDVQAGTLTAQAQGQVTTQSFAAGMTLLAKSDVHIESQAAG
MDAKAARQITVTSTGAGIDMTAPQKITLTSDTDVVLNGKQVKDLSTKSWLKATPFGLNLT
IAQATFGLGNATVWRSNVGVAVSKADVSAIKTDIFGMSSKIGATEYKNNGLATETAAAKN
LLTGLFTII
NT seq 2370 nt   +upstreamnt  +downstreamnt
atgcaacgcatcgtcacggcacacacccctctggggcccgatactctcctcttccgggcc
atgaacggttcggaaggcgtatcgatgctcttcgagttcgaagtggagctgttgtccgaa
tcgtacgccctggatcttcgcgaattgctgggcaagccgctgtcgctggagatcgcggcc
gcagggggcgcaccccgatacctgagtggccacatcacccgctgcacgctggtcggtcgc
gaaaacgccacgtcgcgcctgtacatctaccgcgccacggtcaggccctggctgtggtac
ctgacgcagacctccgacaacaagatattccagaacaagagcgcaccggacatcatcagg
gaggtgctggccgattacccctttcctgtcgaatggcgcctgtcgggcacctaccggaat
tgggaatacggggtgcagtaccaggaaaccgacttcgacttcatcagtcgcctgatggag
cacgagggcatctattactggttccgccacgagcaggacaggcacaccctggtactgacc
gacgacatcgcgcagcatgattcctgtcccggctgcgagacgctgccgtactacggccct
gatcgcgtcgcggtgccgcgcgaggaatacgtgaatgcatgggagccggccgagcaaatc
acgcccagcggcttcgccacgacggacttcgatttccggcatcccggcaccagcatggac
gcgcggcgcgccaacccggggccgtatgacgacggcaaactcgagatctacgaatggctg
ggcggctataccgacccggaccagggcgaacactacacccgcgtgcgccttgaaggcctg
cagtgccgccgcgagctggtatccggcgcgtgcaatgcgcagggattcgcgcccggctac
cgcttcagcctgaccaaccatccgcgtggcgcggaaaaccgtgaatacctgatcgtcgcc
gcgcactatcacatccgcgagggtggctacgccagcgggacaccggatcccatggccttc
gacgtgggcttcaccgcgctgccgtccagcgtgcagttccgtccgccccgcgtgacgccg
ccggcctatacgcacgggccgcaaacggcgaccgtggtgggcaaggacggacagcagata
tggaccgacgaatacggacgcatcaaggtccagttccactgggaccgcgtcgggcagcgc
aacgaaaacagttcatgctgggtgcgggtatccagcccctgggccagcggcggattcggc
ggcatccagctgccacgccgcggagacgaagtcgttgtggatttcatcggcggccatccc
gaccgccccatcgtgatcggccgcgtctacaacggtgccaatatgccgccgtgggagctg
ccgtccaatgcgacgcaaagcgggttcctctcgcgcacgcaagacggaacaccgcgcacc
gccaacgcattgatgttcgaggacaagcccgggcaggaggaaatatggctgcatgcggaa
cgcaatatgcgcacggaagtcgaggcggacgagcaccgcagtgtcgacggttcgcgcacc
acgaccatcggcggtgacgacacgactacgatcgccgggacccgtaccatccatgtgcag
ggcgccgacgccttgactgtcggccaggcccgttcggtcactgttacggataacgaaacc
tacaccgtcaacggcgcgcgcgcgctgcacgtgtccggcggcatggccacggagagcttc
gaccaggggctgacgaccacggtctcggccgatggcgagacccgcacagtcaccggcccc
ttcaaggaaacgctcaataccggacaagaggtgcatgtgagcgcgggcaacgcgctgcac
gacgtgcaggcgggaaccttgacggcgcaggcgcaagggcaggtcaccacgcaatccttt
gccgcgggcatgacgctgctggccaagagcgacgtgcatatcgaatcgcaggccgccggg
atggacgcgaaggccgcgcggcagatcacggtgacgtcgaccggcgcgggcatcgatatg
acggcgccgcagaagatcacgctgaccagcgataccgatgtggtgctgaacggcaagcag
gtcaaggacctgtcgaccaagagctggctcaaggccacgccgttcggcttgaacctgacc
atcgcgcaggcgacgttcggcctgggcaacgcgacggtatggcgctcgaatgtcggcgtg
gccgtatccaaggccgacgtcagtgcgatcaagacggacatattcggcatgtcgagcaag
atcggcgccacggaatacaagaacaacggcttggccacggaaaccgcggccgcgaagaac
ctgttgaccggactgttcacgatcatctaa

DBGET integrated database retrieval system