Allobosea sp. Tri-49: BLM15_03670
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Entry
BLM15_03670 CDS
T05753
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
boi
Allobosea sp. Tri-49
Pathway
boi03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
boi00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
BLM15_03670
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
boi03021
]
BLM15_03670
03400 DNA repair and recombination proteins [BR:
boi03400
]
BLM15_03670
Enzymes [BR:
boi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
BLM15_03670
Transcription machinery [BR:
boi03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
BLM15_03670
DNA repair and recombination proteins [BR:
boi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
BLM15_03670
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_3
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_45
RNA_pol_Rpb2_1
DOCK-C2
Motif
Other DBs
NCBI-ProteinID:
AZO76807
LinkDB
All DBs
Position
745908..750056
Genome browser
AA seq
1382 aa
AA seq
DB search
MVTSLQGRRRVRKFFGKLKEVAEMPNLIEVQKASYDQFLMVEEPKGGRGDEGLQSVFKSV
FPIGDFSGASLLEFVKYTFEPPKYDVDECRQRGMTFSAPLKVTLRLIVFDIDPDTQAKSV
KDIKEQDVYMGEMPLMTDNGTFIVNGTERVIVSQMHRSPGVFFDHDKGKTHSSGKLLFAA
RIIPYRGSWLDIEFDAKDIVYARIDRKRKIPVTSLLFALGMDGEEILKRFYNRVEYVRDD
KGWRVPYDAERMKGFKASVDMIDADTGEVVIEAGKKLVARTARQLADKGLKFLRATNEDL
VGQYVAEDLVDPSTGEVHAEAGEELNMAADPKTGEVKGNLIDLINKGYTEIPVLDIDHIT
VGPYIRNTLGVDKNSRREEALFDIYRVMRPGEPPTLETAENMFQSLFFDSERYDLSAVGR
VKMNMRLDLDAEDTVRILRKEDIFAVVKALVDLRDGKGEIDDIDHLGNRRVRSVGELMEN
QYRLGLLRMERAIKERMSSVDIDTVMPQDLINAKPAAAAVREFFGSSQLSQFMDQTNPLS
EVTHKRRLSALGPGGLTRERAGFEVRDVHTTHYGRICPIETPEGPNIGLINSLATFARVN
KYGFIESPYRRIRDGKQTDEIIYLSAMEEAKYNVAQANAAVDKEGRLTDDLIVCRRAGEV
IVVPVDKVDFMDVSPKQVVSVAAALIPFLENDDANRALMGSNMQRQAVPLVRADAPFVGT
GMEAAVARDSGAAIAARRAGIVDQVDATRIVIRASDEMDPTKPGVDIYRLQKFQRSNQST
CITQRPLVRVGDVIKKGDIVADGPSTEFGELALGRNVLVAFMPWNGYNFEDSILLSEKIV
SDDIFTSIHIEEFEVMARDTKLGPEEITRDIPNVSEEALKNLDEAGIVYIGAEVAAGDIL
VGKITPKGESPMTPEEKLLRAIFGEKASDVRDTSLRVPPGVQGTIVEVRVFNRHGVDKDE
RAQAIEREEIERLAKDRDDEQAILDRNTFARLAEILTGKTGLAGPKGFKKDTVITREVMS
EFPRSQWWLFATADDALMTEIEAMRKQYDESKKRLEQRFLDKVEKLQRGDELPPGVMKMV
KVFVAVKRKIQPGDKMAGRHGNKGVVSRIVPAEDMPFLEDGTHADIVLNPLGVPSRMNVG
QILETHLGWAAAGLGKQIGKALDAYRKAHDSKALRASFDAVYEDNEIIASMDDAELVEMG
QNLRRGVPIATPVFNGAKESDIERLLEQAGLHSSGQSTLYDGRTGEPFDRKVTMGYIYML
KLHHLVDDKIHARSIGPYSLVTQQPLGGKAQFGGQRFGEMEVWALEAYGAAYTLQEMLTV
KSDDVAGRTKVYESIVRGEDNFEAGIPESFNVLVKEMRSLGLNVELINNKPKPGDVPAEA
AE
NT seq
4149 nt
NT seq
+upstream
nt +downstream
nt
atggtaacttccctccagggtcgcaggcgcgtccgcaagttcttcggcaagctcaaggaa
gtggcggagatgccgaacctcatcgaggttcagaaggcgtcctacgaccagttcctgatg
gtcgaggaacccaagggcggccgcggcgatgagggcctgcagtcggtcttcaagtcggtg
ttcccgattggcgacttctcgggcgcgtcgctgctggagttcgtcaagtacaccttcgag
ccgccgaagtacgatgtcgatgagtgccgccagcgcggcatgactttctcggcgccgctc
aaggtgacgctgcgcctgatcgtgttcgacatcgacccggacacccaggcgaagtcggtc
aaggacatcaaggagcaggatgtctacatgggcgaaatgccgctcatgacggacaacggc
accttcatcgtcaacggcaccgagcgcgtcatcgtctcgcagatgcatcgctcgccgggc
gtgttcttcgatcacgacaagggcaagacccattcctcgggcaagctgctcttcgccgcc
cgcatcatcccctatcgcggctcctggctcgacatcgagttcgacgccaaggacatcgtc
tacgcccgtatcgaccgcaagcgtaagattccggtcacctcgctgctgttcgccctcggc
atggacggcgaagagattctcaagcgcttctacaaccgcgtcgagtatgtccgcgacgac
aagggctggcgcgtcccgtacgacgccgagcgcatgaagggcttcaaggcgagcgtcgac
atgatcgacgccgacaccggcgaagtcgtgatcgaggccggcaagaagctggtcgcgcgc
accgcccgccagctcgccgacaaaggcctgaagttcctgcgcgccacgaacgaggatctc
gtcggccaatacgttgccgaggatctcgtcgatcccagcaccggcgaagttcatgccgag
gccggcgaagaattgaatatggctgcggacccgaagaccggcgaggtcaagggcaacctg
atcgacctgatcaacaagggctacaccgagatcccggtgctggacatcgaccacatcacg
gtcggcccctacatccgcaacacgctcggcgtcgacaagaactcgcgccgcgaagaggcg
ctgttcgacatctatcgcgtcatgcgtcccggcgagccgccgacgctcgagaccgccgag
aacatgttccagtcgctgttcttcgactcggagcgctacgacctctcggccgtcggccgc
gtcaagatgaacatgcgcctcgacctcgacgccgaggacaccgtgcgcatcctgcgcaag
gaagacatcttcgcggtcgtcaaggcactggtcgacctgcgcgacggcaagggcgagatc
gacgacatcgaccatctcggtaaccggcgcgtgcgctcggtcggcgagctgatggagaac
cagtaccgtctgggcctcctgcgcatggagcgcgccatcaaggagcgcatgtcctcggtc
gacatcgacacggtgatgccgcaggacctgatcaacgcgaagcccgcggctgccgccgtg
cgcgagttcttcggctcgtcgcagctctcgcagttcatggaccagaccaacccgctctcg
gaagtcacccacaagcgccgtctctcggcgcttggcccgggcggcctgacccgtgagcgc
gccggcttcgaggtgcgcgacgtccacaccacgcattatggccgcatctgcccgatcgag
acgccggaaggcccgaatatcggcctgatcaactcgctcgcgactttcgcgcgcgtcaac
aagtacggcttcatcgagagcccgtaccggcgcatccgcgacggcaagcagaccgacgag
atcatctatctctcggcgatggaggaggcgaagtacaacgtcgcccaggccaacgccgcc
gtcgacaaggaaggtcgtcttaccgacgacctgatcgtctgccgccgcgccggtgaagtc
atcgtcgtgccggtcgacaaggtcgacttcatggatgtctcgcccaagcaggtcgtctcg
gtcgctgcggcgctgatcccgttcctcgagaacgacgacgccaaccgcgcgctgatgggc
tcgaacatgcagcgccaggcggtgccgctggttcgcgccgacgcgcctttcgtcggcacc
ggcatggaggcggcggttgcccgtgactccggcgctgccatcgcggcccgccgcgccggc
atcgtcgaccaggtcgacgcgacccgtatcgtcatccgcgcttcggacgagatggacccg
accaagccgggcgtcgacatctaccgtctgcagaagttccagcgctcgaaccagtcgacc
tgcatcacgcagcgtccgctggtgcgcgtcggtgatgtcatcaagaagggtgacatcgtc
gccgacggcccgtcgaccgagttcggcgagctcgcgctcggccgcaacgtgctggtcgcg
ttcatgccgtggaatggctacaacttcgaggactcgatcctgctctcggagaagatcgtc
tcggacgacatcttcacctcgatccatatcgaggaattcgaggtcatggcccgcgacacc
aagctgggccctgaggaaatcacgcgcgacattccgaacgtctcggaagaggcgctgaag
aacctcgacgaagccggcatcgtctatatcggcgccgaggttgcggcgggcgacattctc
gtcggcaagatcacgccgaagggcgagagcccgatgacgccggaagagaagctgctgcgc
gccattttcggcgagaaggcttcggacgtccgcgacacctcgctgcgcgtcccgccgggc
gtgcagggcacgatcgtcgaggtccgggtgttcaaccgccatggcgtcgacaaggacgag
cgcgcccaggcgatcgagcgcgaggagatcgagcgtctcgccaaggaccgtgacgacgag
caggcgatcctggaccgcaacaccttcgcgcgcttggccgagatcctgaccggcaagacc
ggcctcgccggtcccaagggcttcaagaaggacacggtcatcacccgcgaggtgatgagc
gaattcccgcgctcgcagtggtggctgttcgccacggcggacgacgccctgatgaccgaa
atcgaggcgatgcgtaagcagtacgacgagtcgaagaagcgcctcgagcagcgcttcctc
gacaaggtcgagaagctgcagcgcggcgacgagctgccgcccggcgtgatgaagatggtc
aaggtcttcgtcgcggtgaagcgcaagatccagccgggcgacaagatggccggccgccac
ggcaacaagggcgtcgtctcgcgcatcgtgccggcggaggacatgccgttcctcgaggac
ggcacccatgcggacatcgtgctgaacccgctgggcgtgccctcgcgcatgaacgtcggg
cagatcctggagacccatctgggctgggctgccgccggtctcggcaagcagatcggcaag
gcgctcgacgcctatcgcaaggcgcatgattccaaggcgctgcgggcctccttcgacgcc
gtctacgaggacaacgagatcatcgcctcgatggacgacgccgagctggtcgagatgggc
cagaacctgcgccgcggcgtgccgatcgcgaccccggtcttcaacggcgccaaggagtcg
gacatcgagcggctcctggagcaggccgggctgcactcgtcgggtcagtccacgctctat
gacggccgtaccggtgagcctttcgaccgcaaggtgacgatgggctacatctacatgctg
aagctgcaccacctcgtggacgacaagatccacgcccgctcgatcggcccctactcgctg
gtcacccagcagccgctcggcggcaaggcgcagttcggcggccagcgcttcggcgagatg
gaggtctgggcgctcgaagcgtacggcgccgcctacacgctgcaggagatgctgacggtg
aagtcggacgacgtcgcgggccgcaccaaggtctacgagtcgatcgtgcgcggcgaagac
aacttcgaagcgggcatcccggagagcttcaacgtgctcgtcaaggaaatgcgctcgctc
ggcctcaacgtcgagctcatcaacaacaagccgaagccgggcgacgtgccggccgaggca
gccgagtaa
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