Bosea sp. Tri-49: BLM15_20285
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Entry
BLM15_20285 CDS
T05753
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
boi
Bosea sp. Tri-49
Pathway
boi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
boi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BLM15_20285
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
boi03019
]
BLM15_20285
03400 DNA repair and recombination proteins [BR:
boi03400
]
BLM15_20285
Enzymes [BR:
boi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
BLM15_20285
Messenger RNA biogenesis [BR:
boi03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
BLM15_20285
DNA repair and recombination proteins [BR:
boi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
BLM15_20285
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
HRDC
Helicase_C
RecQ_Zn_bind
ResIII
Motif
Other DBs
NCBI-ProteinID:
AZO79679
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All DBs
Position
4226663..4228501
Genome browser
AA seq
612 aa
AA seq
DB search
MSAPRESEARAILKSVFGYDDFRPGQWEVIEAALGGRDVFAVMPTGSGKSMCYQLPALVA
GGLTLVVSPLIALMRDQVGQLVRAGVSAASLNSMNSEAEAAQAWDKLNSGELRLLFVSPE
RLAGEGLVARLRRLGVTRLAIDEAHCVSQWGHDFRPEYRLLSKVREALGDVPVTALTATA
DRQTRDDIAQQLFPQPPHLVVHSFDRPNLKLAFAPKDQPRRQIDDFLKVHRGGSGIVYCS
SRSRTERLAEGLREKGWKAYAYHAGLEQAERNRNQDIFLQEDGVVVCATIAFGMGINKPD
VRFVVHADMPGSIESYYQEIGRAGRDGLPADTLTLYGVDDMALRRRQIDEKQIDDERRRI
EHKRLNAMIDLCESALCRRSALLSYFGEAVPPCRHGNAPFRCDLCGPTKPELADATLDSR
KLLSAVARSGQRFGASHLADILTGTQTEAIRRQNHDGLKTFGVGNDKPKGAWMALTRKLF
AAGALAEASSEHGGFCLTGKGEDILFGREPIALRVDPLGERRSRRGQREAARADGLDGDT
AALFEHLRQLRLTLAREEGVAAYIIFTDRTLIAMARERPPGLEEMRAIEGVGERKLAQYG
EVFLDAIATFSG
NT seq
1839 nt
NT seq
+upstream
nt +downstream
nt
atgtcggcgccccgcgaatcagaagcccgcgcgatcctgaagtcggtcttcggctatgac
gatttccgtcccggacaatgggaggtgatcgaggccgcgctcggcggccgcgacgtcttc
gcggtgatgccgaccggctcgggcaaatcgatgtgctaccagctgccggctctggtcgcg
ggcggattgacgctggtggtctcgccgctgatcgccctgatgcgcgaccaagtcggccaa
ctggtgcgcgctggcgtctcggccgcctcgctcaactcgatgaacagcgaggccgaagcg
gcacaggcctgggacaagctcaattccggcgagttgcgcctgctgttcgtctcgccggag
cgcctcgcgggcgaaggactggtcgcccgcctacgccgcctcggcgtcaccaggctcgcc
atcgacgaggcccattgcgtctcgcaatggggccatgatttccgcccggaatatcggctg
ctgtcgaaggtacgcgaggcgctcggcgatgttccggtgacagcgctcactgcgaccgcc
gaccgccagacgcgcgacgacatcgcccagcagctcttcccgcagccgccgcacctcgtc
gtccattccttcgaccggccgaacctgaaactcgccttcgcgccgaaggatcagccgcgc
cggcagatcgacgatttcctgaaagtccatcgcggcggctctggcatcgtctactgctcc
tcgcgcagccgaaccgagcgtctcgccgagggcctgcgcgaaaagggctggaaggcctat
gcctatcatgccggcctggagcaggcggagcgcaatcgcaaccaggacatcttcctgcag
gaggacggtgtcgtggtctgcgccaccatcgccttcggcatgggcatcaacaagccggat
gtccgcttcgtcgtccatgccgacatgccaggctcgatcgagagctactatcaggaaatc
gggcgtgccgggcgcgatgggctgccggcggatacgctgaccctctacggcgtcgacgac
atggcgctgcgccgccgccagatcgacgagaagcagatcgacgacgagcgccgccggatc
gagcacaagcgcctcaacgccatgatcgacctgtgcgaatcggcactctgccggcgctcg
gccctgctgtcctatttcggtgaggcggtgccaccctgtcggcacggtaatgcgccgttc
cgctgcgatctgtgcggtccgaccaagcccgagctcgccgatgcgacgctggattcacgc
aagctgctttcggcggtggcgcgttcgggccagcgcttcggcgcaagccatctcgccgac
atcctgaccggcacccagaccgaggcgatccgccgccagaaccatgacgggctgaagacc
ttcggcgtcggcaatgacaagccgaagggcgcctggatggcgctgacccggaagctcttc
gccgccggcgcgctcgccgaagccagcagcgagcatggcggcttctgtctgacgggaaaa
ggcgaggacatcctgttcggccgtgagccgatcgcactgcgcgtcgatcccctgggcgaa
cgacgctcgcgccgcggccagcgcgaggcagcgcgggccgacgggctcgatggtgatacc
gccgccctgttcgagcatctgcgccagctgcgcctgacactggcgcgcgaggaaggcgtc
gccgcctacatcatcttcaccgaccgaacgctgatcgccatggcgcgcgagcggccgccc
ggcctcgaggagatgcgggccatcgaaggcgtcggcgaacgcaagctcgcccaatacggc
gaggttttcctcgatgcgatcgcgacattctctggctaa
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