Bordetella sp. J329: CBF45_00720
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Entry
CBF45_00720 CDS
T05850
Name
(GenBank) ribonuclease II
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
boj
Bordetella sp. J329
Brite
KEGG Orthology (KO) [BR:
boj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
boj03016
]
CBF45_00720
Enzymes [BR:
boj01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
CBF45_00720
Transfer RNA biogenesis [BR:
boj03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
CBF45_00720
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
Rng_hyd_C
Motif
Other DBs
NCBI-ProteinID:
AZV92427
LinkDB
All DBs
Position
complement(169977..171869)
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AA seq
630 aa
AA seq
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MYLFYEEDGGFKIGHILAETDASLQVESESGKRSKIKRTSALFTFDTKDASNFLTQAQAQ
AEDIDLDFLWECSSQEDFEAAEFAADYYGHAPSALEKAALILRLHSAPIYFHRRGKGRYR
AAPADILAAAKAAQEKKRLQAEQQQQWVDEMTAGRLPAPIAEAAEMLLIRPDKNSMAWKA
MDAACQQLQKSPERLLLDLGAWPSPLALHKARFLAANFPRGTGFGDITVPDLGADLPLAD
AQAYSIDDITTTEIDDALSVQRLDDGWLRVGVHVAVPGLAVTRDSELDKHARTRLSTVYT
PGEKIPMQPEVLISRFSLDAGKPVPALSLYVEAYPATGEIRHTETRLERVQVRENLRHNQ
MDAIYSEEALAGPADAHPHLDWMQPLWQLALSLSARRDEVRGKPENNNRVEYSFYLDGNP
DDPDATVRIEPRRRNAPLDRLVAEYMILANTLWGELLARTGLPGIYRSQQAGRTRMSTHA
LPHEAIGVPQYAWCTSPLRRYVDLVNQWQLIAAAQHGISAPLVAPFKPRDADLFAIIGAF
EAQYATWHDHQDAMERYWCLRWFQQQGLKEVTAHVLREDLVRFACAPFVTRVAGMPELER
GTPVRLELMGCDELALTLDCRYLGVIAENE
NT seq
1893 nt
NT seq
+upstream
nt +downstream
nt
atgtatctgttctacgaagaagacggcggtttcaagatcggccatatccttgctgaaacc
gacgccagcctgcaagtggagtcggaaagcggcaagcgcagcaaaatcaagcgcaccagt
gcgctctttacctttgataccaaggacgcttccaatttcctgacgcaagcccaggcccag
gccgaagacatcgacctcgatttcctttgggaatgcagcagccaggaagatttcgaggct
gccgagtttgcggccgattactacggccatgccccttccgcgctggaaaaagctgccctg
atcctgcgcctgcacagcgcccccatctatttccaccgccgtggcaaaggacgctaccgt
gccgcgccggcagacattcttgcagccgccaaggcagcccaggagaaaaagcgcctgcag
gccgaacagcagcagcaatgggtcgatgaaatgacggcaggccgcctgcctgcccccatt
gccgaagccgccgaaatgctgctgatccgccccgacaagaacagcatggcctggaaggcc
atggacgccgcctgccagcaactgcagaaaagccccgagcgcctgctgctggacctgggc
gcctggcccagcccgctggcgctgcacaaggcccgcttcctggccgcgaactttccgcgc
ggcaccggctttggcgacattacggtgcctgacctgggcgcggacctgccgctggccgac
gcccaagcctattccatcgacgacatcaccaccactgaaatcgacgatgcgctgtcggtg
cagcgtctggatgatggctggctgcgcgtaggtgtccacgtggccgtaccgggcctggct
gtcacccgcgacagcgaactggacaaacatgcgcgcacccggctgtccacggtttatacg
cctggggaaaaaattcccatgcagcccgaggtgctgatcagccgcttctcgctggatgcc
ggcaaacccgtgcccgcgctgtcgctgtatgtggaagcctatcctgccaccggcgaaata
cgccacactgaaactcgcctggagcgtgtgcaggtgcgcgaaaatctgcgccacaaccag
atggatgccatctacagcgaggaagccctggccggccccgccgatgcccacccgcatctc
gactggatgcagccgctctggcaattggcgctgtccttgtccgcccgccgcgatgaagtg
cgcggcaagccggaaaacaataaccgggtcgaatacagcttctatctggatggcaacccg
gacgaccccgacgccaccgttcgcatcgagccgcgccgccgcaatgccccgctggaccgg
ctggtggccgaatacatgatcctggccaatacgctctggggcgaattgctggcccgcacc
ggtctgcctggcatctatcgctcgcagcaggcgggccgtacccgcatgagcactcacgcc
ctgccgcacgaggctatcggcgtgccgcaatacgcctggtgcacgtcgccgctacggcgt
tatgtcgatctggtcaaccagtggcaactgatcgccgctgcccaacatggcatctcggcg
ccgctggtggcgcccttcaagccacgcgacgccgacctgttcgcgatcatcggcgccttc
gaggcgcaatacgcaacctggcacgaccaccaggatgccatggagcgctactggtgcctg
cgctggttccagcagcagggcctgaaggaagtgacggcgcacgtcctgcgcgaggatctc
gtgcgcttcgcctgcgccccctttgtcacccgcgtggccggcatgccggagctggaacgc
ggcacgccggtcaggctggaattgatgggctgtgacgaactcgcgctgacactggactgc
cgctacctgggcgtcatcgccgaaaacgagtaa
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